Malus domestica (apple): 103443792
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Entry
103443792 CDS
T03194
Name
(RefSeq) homeobox-leucine zipper protein GLABRA 2-like
KO
K09338
homeobox-leucine zipper protein
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdm03000
]
103443792
Transcription factors [BR:
mdm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
103443792
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
CEP89
KIF21A_2nd
Herpes_BLRF2
YkzP
ArgoL2
Zn_ribbon_NOB1
MRP-L20
HALZ
Motif
Other DBs
NCBI-GeneID:
103443792
NCBI-ProteinID:
XP_008380909
LinkDB
All DBs
Position
09:join(19628416..19628496,19628633..19628925,19629562..19629679,19629784..19629978,19630084..19630458,19630561..19630662,19630785..19630994,19631288..19631462,19631563..19631834,19631928..19632014,19632115..19632495)
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AA seq
762 aa
AA seq
DB search
MGVDMSNNPPTSRTKDFFASPALSLSLAGIFRDAGAAAVASREVEEGDEGSGGGGSAAVG
SVRRREDTAEISSENSGPARSRSEDEFDAEGEHDEDDADGDNKNKKKKRKKYHRHTTEQI
REMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKGEME
KLRDENKAMREQINKSCCPNCGTATTSRDATLTTEEQQLRIENARLKSEVEKLRAALVKY
PPGSSSPSCSAGQDQENRSSLDFYTGIFGIEKSRIMEIVNQAMEELKKMATAGEPLWIRS
VETGREILNYDEYIKEFNIEVPSNARPKRSIEASRETGVVFVDLPRLVHSFMDENQWKEM
FPCMISKAATVDVINNGEGDNRNGAVQLMFAELQMLTPLVPTREVYFVRCCKQLSPEQWA
IVDVSIDKVEDSIDASLVKCRKRPSGCIIEDESNGHCKVIWVEHLECQKSTIQTMYRTIV
NSSLAFGARHWVATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTTSFCR
AIGASSYHTWTKISSKTGDDIRIASRKNLNDPGEPLGVILCAVSSVWLPISPHVLFDFLR
DETRRNEWDIMLNGGPAQTIANLSKGQDRGNAVTIQSMKSKEKSMWILQDTCINSYESMV
VYAPVDTTGMQSVMTGCGASNIAILPSGFSILPDGLESRPMVITSRQEDRSSEGGTLLTA
AFQVLTNSSPTGKLTMESVESANTLISCTLRNIKASLQCEDG
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcgacatgtctaacaatccaccaacttctcgcaccaaggacttctttgcttcc
ccagccctctccctctccctcgccgggatttttcgtgatgctggggcggcggccgtggca
agcagggaggtggaggaaggagatgagggcagcggtggaggcggaagcgcagctgtaggc
agtgttcgccggagagaagacacagcggagattagcagcgagaactccgggccagcaagg
tcgagatcagaagatgaatttgacgcagaaggagagcatgacgaagatgatgctgatgga
gacaacaagaacaagaagaagaagaggaaaaagtaccataggcacaccactgagcaaatc
cgagaaatggaagcgttgttcaaagaatcaccacatcctgatgagaagcaaaggcagcaa
ctgagcaagcaattaggccttgctccaaggcaggtcaaattttggtttcagaatcgtcga
acccaaatcaaggctatacaagaacgccatgaaaattctctgttgaaaggcgaaatggag
aaactccgcgacgaaaataaggcaatgagggagcagataaacaaatcttgctgccccaac
tgtggcactgcaaccactagccgggatgccaccctcacgaccgaggagcaacaactgcga
atcgaaaatgccagactcaaatccgaggtcgaaaaactcagagcagctcttgtaaaatac
cctcccgggtcatcctctccttcctgctccgctggccaagaccaggagaatagaagctct
ttggatttctacactggaatattcggaattgagaagtcgaggataatggagatagtgaat
caagcaatggaagagcttaagaagatggctactgcaggggaaccactctggattcggagt
gtggagactggccgtgaaatacttaattacgatgagtacatcaaagagttcaacattgaa
gttcctagcaatgcgcggccaaagagatccattgaggcctccagagagaccggggtggtg
tttgtggatcttccgcgactagttcacagtttcatggatgagaatcaatggaaggaaatg
tttccatgcatgatctcaaaggcggcaactgttgatgttattaacaatggtgaaggagac
aatagaaatggtgcagtacaattgatgtttgcagagctgcaaatgcttacgcccttggtt
cccactagagaagtgtacttcgttagatgttgcaagcaattgagtcctgaacaatgggct
attgttgatgtttcgattgacaaagtcgaagatagcatagatgcgtccttggtgaaatgc
aggaagcgtccctctggctgcatcattgaggacgaatcaaatggccactgcaaggtgatc
tgggtggagcacctagaatgccagaagagcacaattcagaccatgtaccgcaccattgtc
aacagcagtctagcatttggagcaagacattgggtagcaacgctgcaactgcaatgcgaa
cgacttgttttcttcatggcaaccaatgttcccatgaaggattcaaccggtgtggccacc
cttgctgggcgaaaaagcattctaaaattggcacaaagaatgacaacgagcttttgtcgt
gcaatcggagcatcaagctaccatacctggactaagatctcaagcaaaacaggggacgac
ataagaattgcctccagaaagaacttgaacgacccaggagagcctcttggtgtgattttg
tgtgctgtttcttcagtatggctgcccatctctcctcatgtgctcttcgatttcttaaga
gacgagactcgcaggaatgagtgggacattatgttaaatggaggaccagctcaaacaatt
gcaaacctatccaaaggacaagatcgtggcaatgctgttacaatccagagcatgaaatca
aaagagaaaagcatgtggatactacaagatacctgcataaactcttacgagtcgatggtg
gtctacgctccagtggataccactggaatgcagtccgtgatgacgggatgcggcgcgagc
aacatcgccatattgccttcagggttctcgattcttcctgatgggctggagtcgaggccg
atggtcatcacatccaggcaagaagacaggagcagtgaaggaggaactctgctgacagca
gcatttcaagtcttgacaaattcctcccccacaggcaagctaacaatggagtctgtggag
tctgccaacacactaatatcatgtactttgagaaatattaaagcaagcttgcagtgtgag
gatggctga
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