Malus domestica (apple): 103443795
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Entry
103443795 CDS
T03194
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103443795
04121 Ubiquitin system [BR:
mdm04121
]
103443795
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103443795
Membrane trafficking [BR:
mdm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103443795
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103443795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_UBOX
zf-RING_11
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
CxC4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
103443795
NCBI-ProteinID:
XP_008380914
LinkDB
All DBs
Position
09:complement(19658474..19659487)
Genome browser
AA seq
337 aa
AA seq
DB search
MLNILRSSGTRLVCTHKFLKEERMSGGRNTHWCYDCRRPFRLRGRDAVCPGCDGGFVQEL
DDMVHVSPMDFFELHNDDDRDRRFLEAFSVLHQLTDRRRNGSIRARSDLVPERNPAFAHL
LIFGGQIPFRLSGNGAFEALFNGSPGIGVTRGNMGDYFVGPGLEELFEQLSANDRRGPAP
ASRGSIDAMPTVKITNRHLRSDAHCPVCKDKFELGSEARQMPCDHLYHTDCIVPWLVQHN
SCPVCRQELPPQGSPGARSGHSTSSRSRSSSFGSNTSARESGRENQGRRNPLSYLWPFRS
SSSSSSSSSSHNPTESSSSTMREHNNQMGYSRWPFDY
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatatattgaggagttcagggacgagacttgtttgtacccataaatttctaaaa
gaggagaggatgtcaggtggccgaaacacccactggtgttacgattgcaggcgcccattt
cggctgagagggcgagacgcggtttgcccaggctgcgatggaggatttgttcaagaactt
gatgatatggttcatgtcagcccaatggatttctttgaactgcacaatgatgatgatcgt
gataggaggttcttggaagctttctcagtgttgcaccaattgacagacagaaggcgtaat
ggtagcattagggcaagatcagatttagttcctgagcgcaacccggcatttgctcatctc
ttgatttttggtggccaaataccttttcgactgtctgggaacggtgcttttgaagctctt
ttcaatgggtctcctggaataggcgtgacacggggtaacatgggtgattattttgtaggt
cctggcttagaagaactatttgaacagctttcagctaatgaccggcgaggccctgcccca
gcctccagaggttcaattgatgcaatgcctactgttaagatcacaaacaggcatctccgt
tctgatgcgcactgccctgtttgcaaggacaaattcgagttgggatctgaagcaaggcaa
atgccttgtgaccatctataccacacagattgtattgtaccatggttagtacaacacaac
tcatgccctgtttgccgtcaagaactccctccgcaaggttcaccaggagcaagaagcggt
catagcacaagtagtcgaagtagaagcagtagttttggtagtaacaccagtgcaagggag
agtggtagagaaaaccaaggaaggcgaaatcctctctcttatttgtggccatttcgctca
tctagttctagctccagctccagctctagccataacccaactgaaagtagttcatcaact
atgcgcgaacacaataatcagatggggtattcaagatggccgttcgactactag
DBGET
integrated database retrieval system
