Malus domestica (apple): 103444127
Help
Entry
103444127 CDS
T03194
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mdm
Malus domestica (apple)
Pathway
mdm04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103444127
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdm04040
]
103444127
Ion channels [BR:
mdm04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103444127
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
FKS1_dom2
DUF6708
Motif
Other DBs
NCBI-GeneID:
103444127
NCBI-ProteinID:
XP_008381267
LinkDB
All DBs
Position
01:complement(join(31346715..31347197,31347463..31347714,31347835..31347946,31348049..31348353,31348487..31348684,31348792..31349269,31351376..31351440))
Genome browser
AA seq
630 aa
AA seq
DB search
MAGNVKGLTSDMENQAEEKTDREAGERSKPMCSRGLTWIKKIRNAQQGPYLPIWSRIFVL
SCVFAVSLDPFFFYVVVIDQDNKCFQIDKTLVIVALLMRSITDVIFLVHLICEICDGVQN
PNPKTLKKGAPSMVEQTGGNSDKKTKIRELTDQVAMKIAQKMPWLSVFTVIDFLALLPLP
QLLIGVIFYTMNGSGFVEHKNILNFFLLGQYFPRIYRINLSAKEFKMTSGIWIKGLYNMF
LYILSSHVLGAFWYFFSVQRELTCWQEACVNHSKDPRACLNTFNCDGLSTTARNITFLNE
HCPLDTPNGASSPFNFGIFLDSLQNQNTEQILFRKKFFYSFWWGLRNLSNFGTNLMTSTY
VFENLFAVLISVIGLLLFLYLIGNVQTFMQMEATKTEELREKIKLKKLDVRTWMSRNEIP
DNMKEEILRSIKQKLKRHIDADLHHFLFYILPVNIRTSLKHFLCMKTLKKVKKLEDMDVK
VLTLICNYLKPVRYTENSFVFRMGDPLDCMLFIIEGTVWTYGSTDSQAGQGISSMDTKPL
GKGDFYGEELLDCASHRFTKLPVSSKHVKSQTKVEAFVLMAKDLETVVSKSRLKWEKKEK
KGSQLLESVAASTIASAFRLHLRKNKRALQ
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaacgtcaagggattaacttcagatatggagaaccaggcagaagagaaaaca
gacagagaggccggagaacgttcgaaaccaatgtgcagcagaggccttacctggataaag
aagattcgaaatgcgcagcaggggccttaccttccaatatggagcagaatatttgtgcta
tcatgcgtatttgctgtctctcttgatcctttcttcttttacgttgtggtcatcgatcag
gataacaagtgttttcaaatagacaaaacgttggttattgtagctcttcttatgcggtcg
atcacggatgtcattttcttggtgcatttaatatgtgaaatctgtgacggtgttcaaaat
ccaaatccaaaaaccctaaaaaaaggagccccttcgatggtggagcaaaccgggggaaat
tcagataagaaaacgaaaatcagagagttgactgatcaagttgccatgaaaatagctcaa
aagatgccgtggttatctgtctttactgtaatagactttttggctcttcttcccctccca
caactgctaataggagttattttttacacaatgaatggctcaggatttgtggaacacaaa
aacattctgaatttttttcttctcggtcaatattttccgaggatttatcgaatcaaccta
tcggccaaggaattcaaaatgactagtgggatatggattaagggtctatacaacatgttt
ctctacattctttccagccacgtactcggagctttttggtattttttttctgttcaacga
gagttaacttgttggcaagaggcttgtgtaaatcatagtaaagatcccagggcatgtttg
aatactttcaactgcgatggtctaagtactactgcaagaaatataacatttctaaacgag
cattgcccgttggatactccaaatggtgcttcatctccatttaactttggaatatttctt
gattcccttcagaatcaaaacactgagcaaatactgttcagaaagaagttcttttactcc
ttctggtgggggttgcgaaatctaagtaattttgggactaatctgatgacaagtacatat
gtgttcgaaaacttgtttgcggttctcatttctgtaattggcttgctactgtttttatat
ctcattggaaacgtacagacttttatgcagatggaagctacaaaaacagaagagctgaga
gaaaagattaagttgaagaagctagacgtaaggacatggatgtccagaaatgaaatccct
gataatatgaaggaagaaatcttgagaagcataaagcaaaaattgaaacgacacattgat
gctgatctccatcattttttgttctatattcttcctgtgaatatcagaacatctctgaaa
cattttctttgcatgaagacacttaagaaagtaaaaaagcttgaagatatggatgtcaaa
gtgttgacgttgatctgcaactatctgaagccagtgaggtacactgagaacagcttcgtt
tttcgaatgggtgatccactcgactgcatgctgttcattatcgaagggacagtgtggacc
tacgggtcgactgatagtcaagctgggcaaggaatctcatcaatggacaccaagcccctc
gggaaaggtgacttttacggggaagagcttctcgattgcgcatcacaccgtttcaccaaa
cttccagtctccagcaaacatgtcaaaagtcagacaaaagtagaagcatttgtgctcatg
gccaaggacttggaaacggtagtttccaaatcccggttaaagtgggagaaaaaggagaag
aagggttctcaattgttggagtccgtggcagcttctaccatagcatcagcattccgtctt
catctccgcaaaaacaaacgtgcactacaatag
DBGET
integrated database retrieval system
