Malus domestica (apple): 103444341
Help
Entry
103444341 CDS
T03194
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103444341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103444341
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103444341
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
103444341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Nop14
DNA_pol_phi
BUD22
Pes-10
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
103444341
NCBI-ProteinID:
XP_028964407
LinkDB
All DBs
Position
09:join(32005234..32005875,32009372..32010058)
Genome browser
AA seq
442 aa
AA seq
DB search
MARFSLGGDDDGEGEGSRSPRHKRPRLNGLNSRRFNASTSASTPTRIVQPPPPPPEPPQQ
LQIVEEEDERVSAEEDDSESENDVEEDDDEESPGNEDADTGDSDESDEEEEAAEITISPQ
SPPRIPRRLLVRSLAQYLARDNDRQVGSASGSLASTATAAGVQEAPPSISPAPAPAPAPA
PATAIDASVVFTLTDSDVLDCFICCEPLTVPVYQCENGHIACSSCCTKSKNKCPTCSWPI
GYNRCRAIENVLEAIRVSCQNIKHGCKESMTYNKKNEHEKACIFSPCSCPQSGCNFVSPS
KQLYQHFSSNHVNSATRFRYNCVFSITLFHREKSHTLQEQNDGTLFILDNVEESLGNIVS
ISCIQPSFMGGFYYDLLARTKNGKGSSLRLQSFAKSIPGQVSNPSSTDHLIIPCGFFENG
GSLKMDLRIWHKGKPPLKLTMA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcgagattctcgttaggcggagatgacgacggagaaggcgagggatcccgcagcccc
aggcacaaaaggcctcgtctgaacggtctgaattctcgtcgatttaacgcatccacctcc
gccagcacccccaccagaatcgtacaaccgccgccgccgccaccagaaccaccacaacag
ctacagatcgtcgaggaagaagatgaacgagtatccgcagaagaagatgatagtgagagc
gaaaacgatgtagaagaagacgacgacgaagaaagtcctggaaatgaagacgccgacacc
ggagacagcgacgaaagtgatgaagaggaagaagcagctgaaattaccatctcaccccaa
tcaccaccacgcattccgcggcggcttctcgttcgttctcttgcccagtacctcgcaaga
gacaacgaccgtcaagtaggttctgcttcgggcagccttgcatccaccgccaccgccgcc
ggagtccaagaggctcctccttccatctcacccgcccccgcccccgcccccgcccccgcc
cccgccaccgccatcgatgcctctgttgtcttcaccctaaccgactcagacgtccttgat
tgtttcatttgctgtgagcccttgacggtccctgtctaccagtgtgaaaacgggcatata
gcttgctcctcttgctgcaccaagagtaaaaataaatgtcccacctgctcctggcccatt
ggttataatcgttgccgagccattgagaacgttctggaagcaataagagtttcatgtcaa
aacatcaagcatggctgcaaagagtcgatgacttacaacaagaaaaatgaacatgaaaag
gcatgtatattttcaccttgttcatgcccccagtcaggatgcaactttgtctctccaagc
aagcagttgtaccaacacttcagcagtaatcatgtaaactctgcaacgcgcttccggtac
aactgtgttttttccatcacgttatttcacagggaaaaatcccatactcttcaagaacag
aacgatggcacattatttatcctcgacaacgtggaagaaagtcttggaaatatagtgtcg
attagttgtattcaacccagcttcatgggaggcttctactatgatcttcttgctcgaacc
aagaatggaaagggaagtagtctcagacttcagtctttcgcaaagagcattcctggccag
gttagcaacccttcttcgacagatcacttgataatcccatgtggttttttcgaaaatggt
ggcagcctcaagatggatctccgcatatggcataaaggtaagccccccctcaaacttact
atggcctaa
DBGET
integrated database retrieval system
