Malus domestica (apple): 103444577
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Entry
103444577 CDS
T03194
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103444577
Spliceosome [BR:
mdm03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
103444577
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
103444577
NCBI-ProteinID:
XP_008381750
LinkDB
All DBs
Position
16:join(1247863..1247887,1247989..1248175,1248264..1248336,1248417..1248534,1248639..1248712,1248846..1248982,1249166..1249229,1249482..1249547,1249686..1249755,1250041..1250145,1250475..1250616,1250736..1250832,1250984..1251817)
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AA seq
663 aa
AA seq
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MAIDSLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRIPKSQNESNFD
HSITCIIITHFHLDHVGALPYFTEVCGYQGPIYMTYPTKALSPIMLEDYRKVMVERRGEE
EQFSSHHIAECMKKVIPVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYAKVGDATMVYTGD
YNMTPDRHLGAAQIDRLNLDLLISESTYATTIRDSKYAREREFLRAVHKCVAAGGKVLIP
TFALGRAQELCILLEDYWERMNLKVPIYFSAGLTLQANMYYKMLISWTSQKVKETYSTHN
AFDFKNAHKFDRSMMHAPGPCVLFATPGMISGGFSLEVFKHWAPSAMNLVTLPGYCVAGT
IGHKLMSGKPTKIDLDKDTQIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEK
PRMAILKGKIQSELGIQCYDPANNETVSVPSTHYAKAVASDTFIRSCSNPNFKFSKRSSE
DEHGLSLGTRNSTPGLQVSDERAAEGVLVMEKSKKTKVVHQEELMLMLGEKKHQVQFAYC
CPVQTGNLKEAKSTSGNDDQLCKSERCSRLLRRLSAKLSNEFSEGNIQDFEDHLEVASFR
ASVCLKENCPHRLLDGHGVRNKSEEAVYFCCSWAMADEKLAWQVISICQNFSMHEQSKGA
STL
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgactctctcgtcctcggcgccgggcaagaggtcggtaagagctgcgtggtg
gtgacaatcaatgggaaacgaatcatgttcgactgcggaatgcacatgggctatctcgac
caccgccgctaccccgatttctctcgcattcccaaatcgcagaacgagtcgaacttcgat
cactccattacttgcatcatcatcacccactttcacttagatcacgttggggctcttcct
tacttcaccgaggtctgcggttatcagggtccaatttacatgacgtatccgacaaaggca
ctgtctcctataatgttggaggactatcgaaaagtgatggtggagcgaaggggtgaggaa
gagcagttttcgtctcatcacattgccgagtgcatgaagaaagtaatacctgtggatctg
aagcagacagtgcaggttgataaagaccttcaaatccgtgcatactatgcaggacatgtt
cttggagcggcaatgttttacgcaaaggtgggagacgccactatggtgtacacaggagac
tataatatgacaccagataggcatcttggagcagctcaaattgaccgactaaatttggac
cttcttatttcagaatccacgtatgcaacaaccatacgcgattcaaaatatgcccgggaa
agagaatttctcagagctgttcataaatgtgttgctgccggtggaaaagttctaattcca
acttttgctcttggaagagctcaggaactctgtatcttgttggaagattactgggagcgc
atgaatctaaaggttcctatttacttctcagcaggtttgacccttcaagccaatatgtat
tataagatgcttatcagttggaccagtcagaaagtcaaagaaacgtactccacgcataat
gcctttgattttaagaacgctcacaagttcgaccgttcgatgatgcatgctcctggaccc
tgtgttctgtttgcgacaccagggatgatcagtggtggcttttcacttgaggttttcaag
cactgggctccttcggcgatgaatcttgttacactgcccgggtattgcgtggctggaacc
atagggcataaattgatgtcgggaaaacccaccaaaattgatctggacaaggacacacaa
attgatgttcgatgccagattcatcagttgtctttcagtcctcacacagacgccaaagga
attatggatcttgtaaaatttctctcccctaagcacgtcatacttgttcatggcgagaag
ccgaggatggcgattctaaaaggaaaaatccagtcggagctgggaattcagtgttacgac
cctgcaaacaatgagaccgtgtcagtcccatcaacccactacgcgaaagcagtagcttcc
gacacgttcatccgaagctgttcgaatccaaacttcaagttctcgaaaagaagttcagaa
gatgaacatggtttgagtttgggaaccagaaattcgactccaggactgcaagtaagcgat
gagagggcagcagaaggggttttggttatggagaaaagcaaaaaaaccaaggtagtacac
caagaggagcttatgcttatgttaggagagaaaaagcaccaagtacaatttgcttattgc
tgccctgttcagaccggcaacttgaaagaggccaaaagcacttctggaaacgacgatcag
ctttgcaaatctgagagatgctctcggcttctccgcagattatctgcgaaactttcaaat
gagttttctgaggggaacatccaagactttgaggatcaccttgaagtggcatcgtttcgc
gcatccgtttgcttgaaggaaaactgccctcacagactactggatggccatggcgttcgg
aataaatctgaagaagcagtttatttctgctgcagttgggcaatggcagatgagaagctt
gcatggcaagtcatttcaatctgtcaaaacttctccatgcatgagcaaagcaagggggct
tctactctgtag
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integrated database retrieval system
