KEGG   Malus domestica (apple): 103444764
Entry
103444764         CDS       T03194                                 
Name
(RefSeq) B-type cell cycle switch protein ccs52A-like
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
mdm  Malus domestica (apple)
Pathway
mdm04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103444764
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103444764
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     103444764
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I WD40_Gbeta ANAPC4_WD40 WDR55 Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_RIG_1st Beta-prop_HPS5 NBCH_WD40 Beta-prop_DCAF4 Aldo_ket_red KNTC1_N Beta-prop_WDR41 Beta-prop_WDR35_TULP_N Tricorn_2nd Beta-prop_SCAP Peptidase_M10_C Beta-prop_Vps41 Beta-prop_SPT8 MIOS_WD40 Beta-prop_VPS8 Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 103444764
NCBI-ProteinID: XP_008381933
LinkDB
Position
04:complement(join(9431928..9431981,9432392..9432460,9432567..9432629,9432714..9432815,9433347..9433541,9433651..9433713,9433941..9434120,9435017..9435121,9435379..9435501,9435619..9436098))
AA seq 477 aa
MEDTTPTTPSTPALLRTPQALHSLTPSRHIDRLINYNHHQSPSRTIYSDRFIPSRSGSNF
PLFDISNTPSEGRDDSSSAYGTLLRAALFGPDSAGVVPPATPEKRSAIQMNPPSPNIFRF
KTETRRSMHSLSPFGFDDVVTGVHHSPVKAPRKVPRSPYKVLDAPALQDDFYLNLVDWSS
HNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWAQRGTHLAVGTSNGKVQIWDA
SRCRRVRTMEGHRLRVGALAWSSSMLSSGSRDKTILQRDIRAQDDFVSKLSGHKSEVCGL
KWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHQHGLLASGGGTAD
RCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATL
TGHSYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNTESEIGASSLGRTVIR
NT seq 1434 nt   +upstreamnt  +downstreamnt
atggaggataccactcccacaaccccatcgactccggctctgctccgcactcctcaggca
ctacattccctaaccccatctcggcacatcgaccgcctgatcaactacaaccaccaccaa
tcgccgtccaggaccatctactccgataggttcatccccagtagatccggttccaacttc
cccctcttcgacatctccaatactccatccgagggccgcgatgactcgtcaagcgcctac
ggtactctcctacgcgctgccctctttggacctgactccgccggcgtcgttcctccggcg
actcccgagaaaaggagcgcgattcagatgaacccgcccagccccaacatcttccggttc
aagaccgagactcgccggtcaatgcactcgctttccccttttgggttcgatgatgtggtc
accggagttcaccatagccccgtcaaggctcctcggaaggttccccggtcgccttataag
gttttggatgcacctgctttgcaggacgatttctatctgaatcttgtcgattggtcttcg
cacaatgtgcttgctgttgggttgggaaattgtgtttatttatggaatgcttgtagtagc
aaggtaactaagttatgtgacttggggattgatgatagtgtctgttccgttggctgggct
caacgtggaactcatcttgcggttggaactagcaatgggaaagtccaaatatgggatgca
tcccggtgtaggagggtaagaaccatggagggccaccgactacgcgttggcgccttagcc
tggagttcatctatgctgtcttctggtagccgggacaaaactattcttcaacgtgatatt
cgtgctcaggacgattttgttagcaaactttccggacacaagtcagaggtttgtggactg
aaatggtcatatgataatcgtgagctggcatcaggcgggaatgataacaggctttttgtt
tggaatcaacattcaactcaaccggtgctcaaatactgtgagcatactgcagctgtgaaa
gccattgcatggtctccacatcagcatgggcttcttgcatctggaggaggaacagcagac
cgatgtattcgtttctggaatactaccaccaactcacacttgagctgcatggacactgga
agtcaggtttgcaatcttgtgtggtctaaaaatgtcaatgaactagtcagcacccatgga
tactcccaaaatcaaataatagtttggagatatcccaccatgtcaaagctggcaactctt
acgggccattcatacagagttctttatcttgccatctcacctgatggacagacaattgtc
actggagcaggagatgaaacactaagattttggaatgtgtttccttcccccaagtcccag
aacacggaaagtgaaattggagcatcatcgcttggaagaactgttatccggtga

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