Malus domestica (apple): 103444806
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Entry
103444806 CDS
T03194
Name
(RefSeq) uncharacterized protein
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
mdm
Malus domestica (apple)
Pathway
mdm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103444806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103444806
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
103444806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
WHD_UBR1
Motif
Other DBs
NCBI-GeneID:
103444806
NCBI-ProteinID:
XP_008381968
LinkDB
All DBs
Position
07:complement(join(25785630..25785749,25786134..25786280,25786423..25786500,25786587..25786714,25787057..25787165,25787765..25788031))
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AA seq
282 aa
AA seq
DB search
MNNPMAVAPTKCQMMEEQKRQLGNNNVVNGRYLETNRANMPVFLMKSPPLVSRCLKPDVS
STSASDQQQSSPAVAKLVLSFDPIAEVSEFTMELAATKSENVPKCYAMHVFEDVLPMSVF
SESSQGTLSVEGRILQKFDMKPHGENLENYGKLCRERTKKYMKSRKIQVMNNDNGAHMRP
RPGMMIGFMSPGASEKKKMPTKGSDMKRTRKDRGEMEDIMFNLFEQKPNRTLRQLIQETN
QPEQFLKDILKDLCIYNNKGANQGTYELKPEYRKSVEEPTPD
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaccctatggccgtggcgccaaccaagtgccaaatgatggaggagcaaaagcgg
caactaggcaataacaatgtcgtgaatgggcgttatttggagaccaacagagcaaatatg
ccggtgttcctcatgaaatctcccccgctcgtctctcgctgtctgaaacctgatgtctcc
tccacctccgcttctgatcaacagcagtcttctcccgctgttgccaagttggttctctct
tttgaccctattgccgaggtcagcgagttcaccatggaactggcggccacgaaatctgaa
aatgtacccaagtgttacgctatgcatgtgtttgaagacgttcttccaatgtccgtgttt
tctgagtcatcgcaagggacgttatccgtggaggggaggatattgcagaaatttgatatg
aagccccatggtgagaaccttgagaactatgggaaactttgccgcgaaaggaccaaaaaa
tatatgaagagtagaaagattcaggtgatgaacaacgacaatggggctcatatgaggccc
aggccagggatgatgattggtttcatgtctcctggagcaagcgagaaaaagaaaatgcca
acgaaggggtcagacatgaaaagaacaaggaaggaccgcggagaaatggaagatatcatg
tttaatctctttgaacagaaaccaaatcggacgttaaggcaactgatccaagagactaac
caaccagaacaatttttgaaagacatactcaaggatctttgtatctacaacaacaaggga
gctaatcaagggacgtatgagctgaaaccggaatacaggaaatcagtcgaggagccaact
ccggattag
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