Malus domestica (apple): 103444822
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Entry
103444822 CDS
T03194
Name
(RefSeq) polyadenylate-binding protein 2 isoform X1
KO
K14396
polyadenylate-binding protein 2
Organism
mdm
Malus domestica (apple)
Pathway
mdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103444822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103444822
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103444822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBD_DEAH11
RRM_7
RRM_11
MIS13
BAG2_N
Motif
Other DBs
NCBI-GeneID:
103444822
NCBI-ProteinID:
XP_008381986
LinkDB
All DBs
Position
15:join(33004224..33004517,33004614..33004716,33005101..33005171,33008126..33008317,33008409..33008533,33008625..33008673)
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AA seq
277 aa
AA seq
DB search
MISILGFQWKIPKKCKIDLAKRPRITSVASKYNPMANIRRGRVYTFVKKNSEVAERAMEE
EEHEVYGAEIPDEGELDGDMDAHHADVDMSTADVAAVKELDEMKKRLKEMEEEAAALREM
QAKVEKEMGAVQDPAIAAASQANREEVDARSVFVGNVDYACTPEEVQQHFQSCGTVNRVT
ILTDKFGQPKGFAYVEFVETEAVQEALGLNESELHGRQLKVLPKRTNVPGMKQYRPRRFN
PYMGYRFRRPYVPPYFSPYGYGKVPRFRRPARYMPYY
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaattttgggtttccaatggaaaattccaaaaaaatgcaaaatagatctggca
aaacgaccccgtataactagtgtagcttccaaatataatccaatggcaaatataagacgc
ggacgagtatataccttcgtaaaaaagaattcagaggtcgcagaaagagcaatggaggaa
gaggagcatgaggtgtacggagcagagatcccagacgaaggagaattggacggcgacatg
gacgctcatcacgccgacgttgacatgtccaccgcggacgtcgccgccgtaaaggagctg
gacgagatgaagaagcggttgaaggagatggaggaggaagctgctgctcttcgcgagatg
caggccaaggttgagaaggaaatgggcgctgttcaagatcctgcaattgccgctgcttct
caagcaaacagagaagaggtggacgcacgttcggtttttgttggcaatgttgattatgca
tgcacacctgaagaagtgcagcagcatttccaatcatgtggtacagtcaatagagtgact
atactgacagataagtttggccaaccaaagggtttcgcttatgtggaatttgtggaaacc
gaagctgttcaagaggctctcggcctaaacgagtctgagttgcacggccggcaattgaag
gttttgcctaaaaggacgaatgttcctggtatgaagcaataccggccaagacgcttcaat
ccttacatgggttaccgcttcaggaggccatatgtacctccttacttctcgccctatgga
tatgggaaggttccaaggttcagaaggccagctcgatacatgccgtattactag
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