KEGG   Malus domestica (apple): 103445128
Entry
103445128         CDS       T03194                                 
Name
(RefSeq) squalene synthase-like isoform X1
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
mdm  Malus domestica (apple)
Pathway
mdm00100  Steroid biosynthesis
mdm00909  Sesquiterpenoid and triterpenoid biosynthesis
mdm01100  Metabolic pathways
mdm01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    103445128
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    103445128
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:mdm01006]
    103445128
Enzymes [BR:mdm01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     103445128
Prenyltransferases [BR:mdm01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   103445128
SSDB
Motif
Pfam: SQS_PSY
Other DBs
NCBI-GeneID: 103445128
NCBI-ProteinID: XP_008382334
UniProt: S5WCI7
LinkDB
Position
10:complement(join(8513078..8513143,8513229..8513268,8513367..8513458,8514205..8514293,8514849..8514924,8515513..8515659,8515848..8515952,8516057..8516200,8516859..8516928,8518036..8518111,8519401..8519490,8519730..8519772,8520421..8520615))
AA seq 410 aa
MGALSTMIKHPDDIYPLLKLKIASRHVEKQIPSEPHWAFCYTMLQKVSRSFALVIQQLDT
ELRNAVCIFYLVLRALDTVEDDTSIATDVKVPILLAFHQHIYDPEWHFACGTNNYKVLMD
EFHHVSTAFLELGNGYQEAIEDITKRMGAGMAKFILKEVETIDDYDEYCHYVAGLVGLGL
SKLFHAAGKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL
EDLKYEENSEKAVQCLNDMVTNALIHMEDCLKYMAALRDPAIFKFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTKSIDDVYGAFFDFASVIKSKVDKNDLHATKTLSRV
EAVQKLCRDSGALSKRKSYIINNEQNSTLIVALFIILAIIYAYLSASPRI
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgggtgccttgtcgaccatgatcaaacaccccgacgacatttacccgcttctgaagctc
aaaattgcatcgaggcatgtcgagaagcagatcccgtcagagccccattgggctttctgc
tacaccatgctccagaaggtctctcgtagtttcgctcttgttattcaacagctcgataca
gagctccgcaacgctgtctgtatattttatctggttcttagagctctagacactgtcgag
gatgatacaagcattgcaacagacgtcaaagtccctatcttgttagcatttcatcagcac
atatatgatcccgagtggcattttgcatgtggtacaaataactacaaagttctcatggac
gagttccatcatgtttcaactgcttttttggaacttgggaatggttatcaagaggcaatt
gaggatattaccaaaagaatgggtgcaggaatggcaaaatttatcttgaaggaggtagaa
accattgatgactatgatgaatactgccactatgtggcaggacttgttggtttaggtttg
tccaagctcttccatgctgctggaaaggaagatttggcctcagactctctctcaaattca
atgggcttatttcttcagaaaacaaacatcattcgggattatttggaggatattaatgag
ataccaaagtcacgcatgttttggccacgtcaaatctggagtaaatatgtcaataaactt
gaggacttgaaatatgaggaaaactcagagaaggcagtgcaatgcttgaacgacatggta
actaatgctttgatacatatggaagattgcttgaagtacatggctgcattgagagatcct
gctatattcaaattttgtgccatccctcagatcatggcaattggcaccctagcattgtgc
tacaacaacattgaggtcttcagaggtgtagtcaaaatgaggcgaggtcttacagcaaaa
gttattgaccgaacaaaatcaattgatgatgtctatggtgctttctttgattttgcttcc
gttataaagtccaaggttgacaagaatgatcttcatgcaacaaaaacattgagcagagtg
gaagcggtacagaaattatgtagagactctggagctctgagcaaaaggaaatcttacatc
atcaacaacgaacaaaattcaactctgattgtggcgttgtttattatattggcgatcatt
tacgcttatctctctgctagcccaagaatctaa

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