Malus domestica (apple): 103445423
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Entry
103445423 CDS
T03194
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103445423
Enzymes [BR:
mdm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103445423
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103445423
NCBI-ProteinID:
XP_070662157
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All DBs
Position
10:join(28228886..28229019,28229111..28229164,28229756..28229821,28231966..28232608,28232723..28232826,28232997..28233135,28233361..28233576)
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AA seq
451 aa
AA seq
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MRACSKPTMAVSLNLFLLLLTMAVLLALVASTNASSKSDKNVNSRFVGPKESLSSKNSSM
AERSDEALDEHAVDNPDEIASMVDMTIRNSTERRNLGFFSCATGNPIDDCWRCDPQWQLH
RKRLANCGIGFGRNAVGGRDGRYYVVNDPGNDDPVNPRPGTLRHAVIQDRPLWIVFKRDM
VITLKQELIMNSFKTIDARGVNVHIAYGACITIQYITNVIIHGLHIHDCKSTGNALVRSS
PSHYGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEV
MLLGHSDSYVRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAE
PTINSQGNRYLAPNNAFAKEVTHRVDPNDWTHWNWRSEGDLMLNGAYFIASGTGSGASYA
RASSLGAKSSSLVGSITASAGVLSCRRGYQC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagagcttgctctaaaccaacaatggcggtctctttgaacttgtttttgttacttttg
acaatggcggttcttctagctctggttgcaagcacaaatgcctcttcaaagagtgacaag
aatgtaaattctaggtttgtgggaccaaaggagtcattgagctccaagaactcatcaatg
gcagaaaggtctgatgaagctttggatgagcacgcagtagataatccagatgaaatagcc
tccatggttgacatgaccattcgtaatagcacagagagaagaaatttgggattcttttca
tgtgcgacggggaatccaattgatgattgttggagatgtgaccctcagtggcagctccac
cgcaagcgcctcgcaaactgcggcatagggttcgggcgcaatgccgtgggtggccgcgac
gggagatactacgttgtgaacgaccccggcaatgatgatcccgtcaaccctagacccgga
accctccgccacgccgttatccaggacaggccgttgtggattgtgttcaagcgtgacatg
gtgatcacactaaagcaagagctaattatgaacagcttcaagacaattgatgcacgtgga
gtcaatgtgcacattgcatatggggcatgcattacgattcaatatattactaatgtcatc
atccatgggctacatatccatgactgcaaatctaccggaaatgccctggtccggagctcg
ccgagccattacgggtggaggacgatggcggacggggatggcatttccatttttggatct
agccacatttggattgaccacaattccctttctaattgtgccgatgggctcattgatgct
attatgggctctactgcaattaccatttccaacaactacttcacccatcataatgaggtt
atgttactgggtcacagtgactcctatgtaagggacaagcttatgcaagtgacaattgcc
tacaatcattttggagagggacttattcaaaggatgccaaggtgtaggcacgggtatttc
catgtggtgaacaatgactacacacattgggaaatgtatgccattggtggaagtgctgaa
cccacaattaacagccagggcaacagatatctggcccctaacaatgcttttgcaaaggag
gtcacacatagagttgatccaaatgactggacgcactggaactggagatcagaaggagac
ctgatgctcaatggagcctatttcattgcatcaggaactggttccggagcaagctatgcc
agggcctctagcttgggagccaagtcatcttccctggttggctccatcacggccagcgcc
ggtgtcctcagttgccggaggggttaccaatgttaa
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