KEGG   Malus domestica (apple): 103445449
Entry
103445449         CDS       T03194                                 
Name
(RefSeq) transcription elongation factor SPT6 homolog
  KO
K11292  transcription elongation factor SPT6
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103445449
   03036 Chromosome and associated proteins [BR:mdm03036]
    103445449
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     103445449
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     103445449
SSDB
Motif
Pfam: SH2_2 YqgF HHH_7 SPT6_acidic Spt6_S1 HTH_44 HHH_9 Tex_central_region SH2 Tex_N MRP-S34
Other DBs
NCBI-GeneID: 103445449
NCBI-ProteinID: XP_028965072
LinkDB
Position
10:complement(join(28699803..28700026,28700127..28700622,28700711..28700920,28701134..28702332,28702417..28702564,28703662..28704441,28704519..28705142,28705229..28705414,28705500..28705876,28705974..28706073,28706196..28706268,28706414..28706540,28706720..28706833,28706921..28706951))
AA seq 1562 aa
MGKGVVSDEEDEMIHGEDEDRSLVDDVAVDDSDGGGDGDDVEDEEEEGEGLDEYEKDDFL
VDDVEDEEEEEEGRADSDEEERQKKKKKKKREEYVLDDDDYDLLEDNNVYAFRRKSQGKF
KRLKKAQRNSEGVSDGKTIEQSLFDGEEGYPLEDIAEEEEPEAEADGDVGEDDMADFIVD
DEEFDVTGSPVRQGKVKRRKSTKAPEVPSSSLQEAHDIFGDPQQLIELRKQGLDSGEWRN
MRIKDQFEPSVLSEKYMTDKDEQIQALDIPERIQIYETCTGSPPLNAKRIDDESTWIYDQ
LTSGIIPFYGMTDLGKSISRDDIRNFLELHHVQMFDIPFIAMYRKEECLSLLKDPKHLEL
EDENQDKNKNKPELKWHRLLWTIQDLDRKWLLLQKRKSALKSYYKKRFEVESQCISEETR
LTLNQQLFESVMKSLEAAKSEREVDDADAKFNLHFPPGEGGVDAGQYKRPKRKSLYSICI
KAGLWHAARKFGYSSEQFGLQLSLENMRMDELEDAKETPEEMASTFTCAMFDTPQAVLKG
ARHMAAVEISWEPCVRKYVRSNYLDITEISTNPTLEGNVAIDASHQFAGVKWLKRKPLNR
FEGAQWLLIQKAEEEKLLQVTIQLPEDRLNKLISDFNEYYLSDGVSKSAQLWNEQRKLIL
QDALFNFLLPSIEKEARSLLTSRAKHWLRVEYGNALWNQVSVGPYQRKENDGSSNNEAAP
KVMACFWGPGNPATTFVMLDSSGEVLDVLYAGALSLRFLNANDEKRKKDEQERILKFMID
HQPHVVVLGGVNLSCTRLKDDIYEIIYKMVEEHPRDVGADMDGLSIVHGDESLARLYENS
RISSDQLPMQLQSGIVKKAVALGRYLQNPLAMVATLCGPGREILSWKICALEHFLTPDEK
YEVVEQVMVDVTNQVGIDLNLAISHEWLFAPLQFISGLGPRKAASLQKMLVGFGEAVYTR
KDMSKDTSNPPTLKDKLKRKYGLDNRVFINACGFLRVRLSGSAGSSYTDIDLLDDTRINP
ESYQLAEQLAKDVYGVEGRNDDDDVVGFVREHPKYLKNIDVEEYAKSKRCEKKIITLYDI
RRELIQGFQDWRKKYEEPTQDEEFYMITGETEDTLAEGKIVQVTVRRVQADRAQLALECG
LTGILMKEDYHPDDWRGISDLSDRLNEGDILTCKIKSIQKKSYRVFLAYRESEIRNDRSH
IQNLDTYYQEDWKSLQSEQEKAQKSMQLEKKNFNPRMIVHPRFQNISADESMRLLSDKDP
GESIFRPSSRGPSHLSLTLKIYDGVYAHKDIVEGGKEKKDITSILRIGKTLTIGEDTFED
LDEVVDRYVDPLVAQLKAMLNYRKFRRGTKAEVDALLKIEKLENPARIVYSFGVSHEYPG
TIILTYIRSSNPHHELVGMYPKGFKFRKRMFKKIDQLVEYFQRHVNDPPQELGPPIRSVA
AIVPMRSPATRGSSGASVGSGGGGSTNDGGRRSQTSGRDRSSTSSSRTGRNDMGNFPGAK
VQNSPGREAFPGGWGAGGSGSGSGWGGKSNDGWGQGSGGAYGDVVDPRASGWDSDPKRRR
FR
NT seq 4689 nt   +upstreamnt  +downstreamnt
atgggcaaaggtgttgtctccgacgaggaagatgagatgattcatggagaggacgaggac
aggtcgcttgttgacgacgttgcagtggatgactctgacggtggcggtgacggtgacgac
gtggaagatgaagaggaggagggcgaaggtctggatgaatatgagaaggatgattttcta
gtggatgatgtcgaggatgaagaggaggaggaagaagggagagcggacagtgatgaagaa
gaaagacagaagaagaagaaaaaaaagaaaagggaggagtatgtccttgatgacgatgac
tatgatctcctggaggacaataatgtgtatgccttccgcagaaagtctcaggggaaattt
aagcgactgaaaaaagctcagaggaactctgagggggtatctgatgggaagacgattgag
caatctttatttgatggtgaagaaggttatccgcttgaggacattgcagaagaggaggaa
ccagaagcagaagccgatggagatgttggtgaagatgatatggcagactttattgtcgat
gatgaagagtttgatgtgactggatctccagtgagacaagggaaggttaagagaagaaaa
tctacaaaggcaccagaagtcccatcatcttctttgcaggaagcacatgatatatttggt
gatcctcaacaactgatagaacttcgaaagcaaggtttggattccggggaatggaggaat
atgaggattaaagatcagtttgaacccagtgttctttctgaaaagtatatgacagacaag
gatgaacagattcaggcgcttgatattccggaaagaattcagatatatgagacatgcact
ggttctcctccactgaatgcaaaacgtatagatgatgagagtacctggatatatgatcaa
cttacgagtggtataatacccttctatggcatgacagacttggggaaatctataagcagg
gatgacatcagaaattttttggagttgcaccatgtgcaaatgttcgatattccctttatt
gctatgtatcggaaagaggagtgtctaagcttattgaaagatcccaaacaccttgaattg
gaagacgaaaaccaggacaaaaataagaacaaacctgagctaaagtggcacagattactt
tggacgattcaggacttggacagaaaatggctgctgcttcagaagcgaaaaagtgcattg
aaatcatactacaagaagcggtttgaggtagaatctcaatgtatatctgaggagaccaga
ctcacattgaatcagcagctttttgaatcagttatgaagtcacttgaggctgcaaaatca
gagagagaagttgatgatgctgatgccaagtttaacttgcattttcctccaggcgaggga
ggtgtggatgcaggacaatataagaggccgaagaggaaatcactttatagtatctgcatc
aaggctggcctgtggcatgctgcaagaaagttcggctacagctctgagcaatttggactg
caattatcactagaaaatatgagaatggatgagttggaggatgctaaggagacaccagag
gagatggcttccacctttacatgtgcaatgttcgatacacctcaagccgtgctcaaagga
gctaggcatatggcagctgttgagataagttgggagccatgtgtcaggaagtatgttcga
agcaattacttggatataactgagatatcaacaaacccaacacttgaaggaaatgttgca
atagatgcttctcatcagtttgcaggggtgaagtggctgaaaagaaagccattaaataga
ttcgagggcgcgcaatggctgcttatccagaaggctgaagaggagaagcttcttcaagtt
actattcagctgccggaagacagactaaataagttgatcagcgactttaatgagtactat
cttagtgatggtgttagtaaatctgcacaactgtggaatgagcagcggaagctgatattg
caggatgcactttttaatttccttctaccttcaattgagaaagaagcaagatccttattg
actagtagagcaaaacactggttacgtgtggaatacggaaatgctttgtggaatcaagtc
tctgtgggaccttatcaacggaaggaaaatgatggtagctcaaacaatgaagctgcaccg
aaggtcatggcttgcttttggggacctggtaacccagcaaccacttttgtgatgttagat
tcatctggggaggtgctagatgtactttatgccggggccctctctttacgcttcctcaat
gctaatgacgagaagcgtaaaaaggatgaacaagaacgcattttgaagttcatgattgat
catcaaccacacgtcgtcgtcctagggggtgttaacttgtcttgtactcgcctgaaggac
gatatctatgagataatttataagatggtggaggagcatccaagagatgttggggctgat
atggatggcctaagcattgtacatggggatgaatctttggctcgcctatatgaaaattct
cggatttcatctgatcagctaccaatgcagctgcagtcaggcattgtcaagaaggctgtg
gctcttgggcgttatcttcaaaatccgttggccatggttgccacgctttgtggaccagga
cgagagatcttatcttggaaaatctgcgctcttgagcactttctcaccccagatgagaag
tatgaggtggttgaacaggtcatggtagatgttacaaaccaggtaggcattgacctaaat
ttggctataagccacgaatggttatttgcaccacttcaattcatttctggactcggacct
agaaaggcagcctcgttgcagaagatgttggtaggctttggtgaagcagtatatacacga
aaggacatgtcaaaggacacgtcaaatccaccaacactaaaggacaagttaaagagaaaa
tacgggcttgataatagggtttttattaatgcttgtggtttcctgcgtgttcggctgagt
gggtcggctggtagcagctacaccgatattgatctgctggatgataccagaatcaatccg
gaatcttatcaacttgcagaacaattggcgaaagatgtttatggtgtggaaggtcgcaat
gatgatgatgatgtggtggggttcgtcagggagcatcctaaatatctaaagaacatcgat
gttgaagaatatgctaaaagcaaacggtgtgagaaaaagataattacattgtatgatata
aggagagaattaatacagggttttcaggactggcgtaaaaaatatgaagaaccaacccag
gatgaagaattctacatgattacaggtgaaacggaggatacccttgccgaaggaaaaatt
gtgcaggtcacagttcgcagggtgcaagctgatcgtgcacaacttgctcttgaatgtgga
ttgactggtattcttatgaaagaagactatcatccagatgattggaggggtatttctgac
ttgtctgatagactgaatgagggtgatattctcacttgcaagatcaaatcaattcaaaag
aaaagttaccgggtgttcctagcttatagagagagtgagattagaaatgaccgatctcac
attcagaatcttgatacctattaccaagaagactggaaaagtctacagagtgagcaagaa
aaagctcagaagagtatgcagctggaaaagaagaatttcaatccaaggatgatcgttcat
cctcgcttccagaatatatctgcagatgaatcgatgaggttattgtctgataaggatcct
ggggaaagcatttttcgtcctagttcccgtgggccttctcatttatccttaaccctcaag
atttatgatggagtttatgctcataaagacatagttgaaggtggaaaggaaaagaaggac
attacgagcatactccgtattggaaagaccctgaccattggggaggacacttttgaggat
ttggacgaggtggtggatcgttatgttgatccattagtggctcagttgaaggcaatgcta
aattatcgaaagttcaggaggggaacaaaggcagaggttgatgctcttttgaagattgag
aaattggagaatcccgcgcggatagtttatagctttggggtatcacatgaatatccaggc
acgataattctgacctatattcggagttcaaatccacaccacgagttagttggaatgtat
ccaaagggattcaagttcagaaaacggatgtttaagaaaattgatcagcttgtagagtat
tttcaacgccatgtcaatgaccctccgcaagagttagggccaccaattagatcagttgct
gctattgtgccaatgcgaagccctgcaactcggggttcttcaggggcatccgtgggcagt
ggtgggggtggttcaaccaatgatggtgggcggagaagccagacttctggcagggatcga
tcatctacatcgagttcacgaacaggccgaaatgatatgggcaactttccgggtgcaaag
gttcaaaactcaccgggaagggaagctttcccaggtggctggggtgccggtggaagtggc
agtggcagtggctggggtggcaagagcaatgatggatggggtcaaggaagtggtggtgca
tatggagatgttgttgatcctagggcttcaggctgggattctgacccaaaacgaagaagg
ttcagataa

DBGET integrated database retrieval system