Malus domestica (apple): 103445807
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Entry
103445807 CDS
T03194
Name
(RefSeq) cyclin-T1-3-like
KO
K15188
cyclin T
Organism
mdm
Malus domestica (apple)
Pathway
mdm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103445807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103445807
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
103445807
Brd4/P-TEFb complex
103445807
7SK RNP complex
103445807
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cyclin_N
CycT2-like_C
Cyclin_C
Cyclin_C_2
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
103445807
NCBI-ProteinID:
XP_008383086
LinkDB
All DBs
Position
10:complement(join(32363521..32364569,32364823..32364974,32365052..32365227,32365703..32365837,32366451..32366532,32367806..32368032))
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AA seq
606 aa
AA seq
DB search
MASSSPAESTPHSVNDGSTHKDIQDRIEEGSYWYFFRKEIEENSPSRRDGIDLKKETYLR
KSYCSFLQDLGIRLKVPQLTIATSIIFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETP
RPLKDVILVSYEIMHKKDPKAVQRIKQKEVYEQQKELILLGERVVLGTLGFDLNVLHPYK
PLVEAIKRFKVAQNALAQVAWNFVNDGLRTSLCLQFKPQHIAAGAIFLAAKFLRVKLPSD
GETIWWQEFDITPRQLEEVSNQMLELYEQNRVPASNQVAGSGGAHRIPAKGTASNEEHAT
SNCHLQAGGARPETLKPASATPAPEQSDVGNDDGSPRTNQCQNNAYRSTEVKNALDQNVD
VEFKDNQHAAPLSSDQEKIGDAQNVSEFQSAGCGEEGLEDNGKLDTIEAEKLKDKQLGQS
LENGQGSLGQSPQDVIKKIDRNKVKAALEKRRKSQGDMSQKKDLMDEDDLIERELEDGIE
LASWSEKVKGDGSQSMPKPSSTPENENLHLGNHHEGVRDDGTDLNNAKGEGSALADGGQG
SPIFSDQKRKAVSPPPLDDAEKKQRHDYEPGTLNHNQFDNTEDHIMAGLVGHSDMDHIRP
VQENPV
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggctagttcttcccctgctgaatccactcctcatagcgtgaatgatggaagtacccat
aaagacattcaggacaggatagaggaaggatcctattggtacttctttagaaaggaaatt
gaagaaaattctccatctagacgagacggcattgacttgaagaaggagacatatttacgc
aagtcatactgttcttttctacaagatttgggtattagacttaaagtaccccagttgacg
attgcaacatccataattttctgtcatcgattctttcttcgtcaatcacacgcaaagaat
gatagaaggacaatcgcgacagtgtgtatgtttcttgctgggaaggttgaagaaactcca
cggccactaaaagatgttatccttgtgtcttatgaaattatgcacaagaaagatcctaaa
gcagtacaaaggatcaagcaaaaggaggtatatgaacagcagaaggaattaattttactt
ggtgagagggttgttcttgggacgcttggctttgatcttaatgtactccatccatataaa
cccctcgttgaagcgataaagagattcaaagtagctcaaaatgcccttgctcaagttgca
tggaattttgttaatgatggacttcggacatctctatgtttgcaatttaaaccccagcac
attgcagctggtgccatttttcttgctgccaagttcttaagagtcaagctcccgtcagat
ggcgagacaatctggtggcaagagtttgacatcaccccacgccaattggaggaagttagc
aatcaaatgttggaactgtatgaacaaaatcgagttccagcttccaatcaagtggcagga
agtggaggcgctcatcggattccagccaaaggtacagctagcaatgaagaacatgctaca
agcaactgtcatttacaggctggaggtgcgaggcctgaaaccttgaaacctgcatcagct
acaccagcacctgagcagtcagatgttggaaatgatgatggatctcctagaactaatcaa
tgtcaaaataatgcctacagaagtacagaagtaaaaaatgctctggaccagaatgttgat
gtagaattcaaagataatcaacacgctgcaccattgtcgtccgatcaggagaagattgga
gatgctcaaaacgtatcagaatttcagtcagcgggatgtggtgaagaaggtctagaagat
aatgggaaacttgatacaatagaagccgagaaattgaaggacaaacaattaggtcaaagc
ctggaaaatgggcaaggttcacttggccagtcaccccaggatgttataaagaagattgac
agaaacaaggtgaaggcagcactggaaaaacgacggaagagccaaggggatatgagtcaa
aaaaaggatctgatggatgaggatgatcttattgagagggaactcgaagatggtattgaa
ctggcttcttggagtgagaaagtaaagggagatgggagtcaaagcatgccgaagccctca
agtacgccagaaaatgagaacctgcatctaggaaatcatcatgagggtgtccgtgatgat
ggaactgatctaaataatgccaaaggtgaggggtctgcacttgctgatggtggccaagga
tcacccattttcagtgaccagaagagaaaagcagtaagccctcctccactcgatgatgca
gagaagaagcagcggcatgattatgaacctggaaccctgaaccataatcagtttgataat
acagaagatcacattatggcgggcctggttggacacagcgatatggatcacataaggcca
gtacaggaaaatcctgtctga
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integrated database retrieval system
