Malus domestica (apple): 103446338
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Entry
103446338 CDS
T03194
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103446338
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103446338
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
103446338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
Prok-RING_1
zf-Nse
zinc_ribbon_16
RINGv
Baculo_RING
Prok-RING_4
FANCL_C
PHD_NSD
Arc
DUF1272
zf-RING_6
SLX1_C
PHD
zf_RING_Vps8
RH_dom
Tmpp129
Motif
Other DBs
NCBI-GeneID:
103446338
NCBI-ProteinID:
XP_008383650
LinkDB
All DBs
Position
12:complement(28792884..28794020)
Genome browser
AA seq
378 aa
AA seq
DB search
MPPLFSCAARHMALALFFFLLLSPQISLVRAQPGPDRADPYRYQRFSPSMAIIIVVLIAA
LFLMAFFSIYIRHCSEANQPGSVRPGGPHTGRSRRGAASRGLDAAVLDTFPTLDYAEIKG
LKIGKEALECAVCLNEFEDDETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPQPG
DSAPQLTQLGSAQQAGDVEAQNDAVNSAAERDDQVMLERPQQEPELLNLNQTLNRNRTRG
SRSSRLLRLFPRSHSTGHSLVQPGEDTERFTLRLPVEVRKQIMNRKLNRSTSLLVLPREG
SSRRGPRTGESGSTNRVRSYRRLEPLDRQFKSDRWVFSKTPTFLTRMSSLLSPKVAVSDG
EKPTEPAMSRSSSARPPV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgctcttctcctgcgccgccaggcacatggccctcgctctcttcttcttcctc
ctcctttctccacaaatctcgctcgtcagagctcagcccggaccggaccgagccgaccct
taccgctaccagaggttcagcccgtcgatggccatcatcatcgttgtactaatcgccgcc
ctcttcctcatggccttcttctcaatctacatccgccactgctccgaagccaaccaaccc
ggcagcgtccgccccggagggccccacaccggccgatcccgacgcggcgcagcctcccgc
ggcctcgacgccgccgtcctcgacaccttccccaccctcgactacgccgaaatcaaaggg
cttaaaatcgggaaagaggcgctcgagtgcgccgtctgcttaaacgaattcgaggacgac
gaaacgttgcgtttgatccccaaatgcgaccacgtgttccaccccgagtgcatcgacgag
tggctggcgtcacacaccacctgtcccgtgtgccgggccaacctcgttcctcagcccggc
gactcggcgccacaactcactcagttgggatcggcgcagcaggcgggcgacgtcgaagct
caaaacgacgccgttaactcggcggcggagagagatgaccaggtaatgctagaacgacca
caacaagaacctgagctgttgaacttaaaccagacgctgaatcggaaccgtacacgcgga
tcgagatcaagcaggttgcttagattgttcccgcggtcgcactcgaccggacactctctt
gtccaaccgggagaagacactgagcggttcaccttgagactaccggttgaagtgagaaaa
cagatcatgaatcggaagctgaaccggtccactagcttgttggtcttgccccgagaaggg
agttcgaggcgtggtcctcgaaccggcgagagtggcagtactaatagagtgaggagctac
agaaggctcgagccattggaccggcaattcaaatcggaccggtgggtgttctccaaaacg
ccgacgtttctcacgaggatgtcgagtctcttgtcgccaaaggtggcggtaagtgacggc
gagaagccgaccgagccagcgatgtcgaggagtagctccgctcggcctccggtttaa
DBGET
integrated database retrieval system
