KEGG   Malus domestica (apple): 103446439
Entry
103446439         CDS       T03194                                 
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
  KO
K18998  RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16]
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mdm01009]
    103446439
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103446439
Enzymes [BR:mdm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     103446439
Protein phosphatases and associated proteins [BR:mdm01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   103446439
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     103446439
SSDB
Motif
Pfam: dsrm NIF DSRM_2 Dicer_dsRBD
Other DBs
NCBI-GeneID: 103446439
NCBI-ProteinID: XP_008383777
LinkDB
Position
10:complement(join(40125629..40125737,40125991..40126058,40126154..40126219,40126865..40126954,40127072..40127301,40128104..40128200,40128913..40128966,40129089..40129219,40129804..40129867,40129981..40130565,40130735..40130818,40130919..40131021,40131135..40131205,40131334..40131491,40131593..40131803,40131989..40132465,40133209..40133481))
AA seq 956 aa
MYKSVYKGEDLLGEVEIYPTENENKNIQDELKEIRISYFSQPSERCPPVAVLHTISSNGV
CFKMMESKTSPSSSQDTPLFLLHSSMTQENKTAVMPLGGEELHLVAMQSRNGDKQCPCFW
GFYVASGLYNSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKISTEVDPQRI
SGMLAEIKRYQDDKFILKQYAENDQVLDNGRVIKTQAEVVPALSDNHQPIIRPLIRLHEK
NIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLD
PDSNLINPTKLLDRIVCVKSGSRKSLFSVFQESLCHPKMALVIDDRLKVWDDRDQPRVHV
VPAFAPYYAPQAEANNAVPVLCVARNVACNVRGGFFREFDDSLLQKIPEIFYEDDIKDVP
SPDVSNYLVSEDDGSAINGNRDPLTFDGMADIEVERRLKEATSAALTASSVVTNVDPRLA
SLQYSMAPSSSIISLPSSQPSAMHFPSIQFPQAASVVKPLGHLGAAEPSLHSSPAREEGE
VPESELDPDTRRRLLILQHGQDTREPPPSEPPFPVRSPVQASVPRVQPRPGWFPVEEEMS
PRQLSRMVPKELPLDPDPMQIEKHRPHHSSFFSKVDNSIPSDRILQENQRLPKEAFHRDD
RLRFNHELAGYHSMSGEEIPLSRSSSMNRDVDFESGQAISNAETPAGALQEIAMKCGAKV
EFRPALVASAELQFYVEASFAGEKIGEGTGKTRREAHFQAAEGSLKNLANVYLSRFKHDS
VPVQGEMIKFPNVNNNGFVGNANSFGIQSFPKDESLSSSSESSRPLDPRLEGPKKSMSSV
SALKELCMMEGLGGVVFQPRPPPSANSVEKDEVHVQVEIDGEVLGKGIGLTWDEAKMQAA
EKALRSLRPTLFAQKRQGSPRSFQGMPNKRMKQEFPQVLQRMPSSSRYPKNAPPVP
NT seq 2871 nt   +upstreamnt  +downstreamnt
atgtataagtcggtgtataaaggcgaagatttacttggggaagtagagatatatccaaca
gagaacgagaacaagaatattcaggatgagttgaaggaaatcagaataagctatttttct
caaccaagtgaaagatgtccaccagtggcagtgcttcataccataagctccaatggagtt
tgcttcaaaatgatggagtcaaagacgtcaccgtcgtcgtctcaggacacgccgctcttt
cttttgcactcctccatgactcaggagaacaagactgcagtaatgccgctaggaggggag
gagcttcatttggttgccatgcaatccaggaatggtgataaacagtgtccatgtttttgg
ggattctatgttgcatcaggactatacaattcttgccttgtcatgctgaatcttagatgt
ctgggcattgtatttgatcttgatgaaacactcattgttgcaaatacaatgcgctccttt
gaagatcgaattgaggccttgcagaggaagataagcactgaggtggacccacaacgcatt
tctggtatgcttgcagagatcaaacggtatcaagatgacaagtttatattgaaacaatat
gctgaaaatgatcaagttcttgataatgggagggtcatcaaaactcaagctgaggttgtt
ccagccttgtctgacaatcatcaacctattattcggccccttatacgattacacgagaaa
aatattatactgactcgcattaatccgcagattcgtgatacaagtgttctcgtgaggttg
agacctgcatgggaggatcttcggagctacctgactgcaagggggcgcaagcggtttgag
gtttatgtttgcacaatggctgaaagggattatgcattagaaatgtggaggcttcttgat
cctgattcaaatttgataaacccaactaaactactggatcgcattgtctgtgtgaagtct
ggttcaagaaagtcgttgttcagtgtcttccaagaaagcttatgtcatcctaagatggca
ttggtaattgatgatcgcttgaaagtgtgggatgacagagatcaacctcgggtgcatgtt
gttcctgcatttgccccgtattatgctcctcaagctgaagcaaataatgctgtccctgtc
ctgtgtgttgcaagaaatgttgcctgcaatgttagaggtggattttttagagaatttgat
gacagtcttctacaaaagattcctgaaattttttatgaagatgatattaaagatgtccct
tcgcctgatgtgagcaattatctagtttcagaggatgacggttctgctataaatggaaac
agagacccacttacttttgatggcatggcagacattgaagttgaaagaagactgaaggaa
gcaacctcagctgctttaacggcttcttcagtagtcactaatgtagatccaaggcttgct
tctcttcagtactcaatggctccttcctctagcataatttcactgccatcaagtcagcca
tcagcgatgcattttcctagtatacagttccctcaggcagcttcagtagttaaaccgttg
ggtcatcttggcgctgcagaaccaagcttgcatagttctcctgctagagaggagggagag
gtacctgaatcagagttagaccctgatacaagacggaggctactgattttgcagcatggc
caagatacaagagaaccaccaccaagtgagcctccatttcctgtcagatctccagtacag
gcctctgttccacgggtgcaaccgcgtccaggctggtttccagtggaagaagaaatgagc
ccacggcaactgagccggatggtacccaaagaacttccgttagatccagatcccatgcag
attgagaagcatcgacctcatcattcatcttttttctctaaggttgataattctattcca
tctgataggattcttcaagaaaatcaaagattgccaaaagaggcatttcatagagatgat
cggctgagattcaaccatgaattggctggctatcattcaatgtcaggtgaggagattccc
ttgagtcgttcctcttccatgaatagagatgtggactttgaatctggacaagctatatca
aatgcagaaactcctgctggagccttacaggaaatcgcaatgaagtgtggagccaaggtg
gagtttaggccagctttggttgctagcgcagaactgcagttttatgttgaggcttcgttt
gcaggagagaaaattggtgaaggaactggtaaaacaagaagggaagctcatttccaggct
gctgagggttctcttaaaaacttagccaatgtttacctttcccgcttcaagcatgattct
gtgcctgttcaaggagaaatgattaagtttcctaatgttaacaacaatggttttgtgggt
aatgcgaattcttttgggatccagtcatttcccaaagatgagtccctgtcatcttcttca
gagtcttctaggccactagatcctaggcttgaaggccctaaaaaatctatgagttcagta
tctgccctcaaagaactttgtatgatggagggtcttggtggtgtagtttttcaaccacga
cctccaccctctgctaattcagtcgagaaagatgaagtgcatgtacaggttgaaatagat
ggagaggttctggggaaggggattgggttgacgtgggatgaggctaagatgcaggctgct
gaaaaggcgctcagaagtctaagaccaactctatttgctcagaaacgtcagggttctcca
aggtctttccaagggatgccaaataaacgtatgaagcaggagtttccacaagttctgcaa
cggatgccctcttcttctagatatccgaaaaatgctccgccagttccctga

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