Malus domestica (apple): 103446480
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Entry
103446480 CDS
T03194
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
mdm
Malus domestica (apple)
Pathway
mdm04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103446480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103446480
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
103446480
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
103446480
NCBI-ProteinID:
XP_008383826
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Position
10:39085174..39090241
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AA seq
588 aa
AA seq
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MDPKRKKSGLHDPEDEYRVRSVFPDEVLERVLGMVESGKDRGSVSLVCKDWYDAERWSRR
HVFIGNCYATSPEIVSRRFRNIRSVTLKGKPRFADFNLVPDHWGSDVRPWVEAFAAEYPL
LEELRLKRMTVTDESLEMLGVCFGGFKALSLVSCDGFSTDGLAAIATHSKNLIELDIQEN
QIDEKSGSWLGCFPETFTSLEILNFASLNSDVDFDALERLVKRCISLKVLKVNKNVTLEQ
LQRLLTNAPQLLELGTGSFAVQEIAACQNSQFLRAFSNCKNLHTLSGLWEATTLYLPVVY
PACTTNLTFLNLSYAAALQSWDLAELVAYCPRLRRLWVLDTVEDQGLKAVGSNCPLLEEL
RVFPSDPDGDGIIRGVTESGFVAVSHGCRKLHYILYFCWQMTNAAVATVAQNCPDITHFR
LCIMIPGQPDYMTNEPMDEAFGAVAKNCTKLQRLSVSGLLTDHAFEYIGKYAKNLEKLSV
AFAGKSDLGMQCVLKGCPKLKKLEIRDCPFGNAAFLSDIEKYESMRSLWMSACNVTINAC
RLLASQMPRLNVEVMKDEGDDDCVADKVYVYRSVAGPRRDAPPFVLTF
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaaaaggaagaaatccgggttgcacgacccggaagacgaatacagggtccgg
tcggtatttcccgacgaggttctggagcgggttctgggcatggtggagtcgggaaaggac
cggggctcggtgtcgctggtgtgcaaggactggtacgacgcggagcggtggtcgcgccgc
cacgtgtttatcggaaactgttacgccacatcgccggagattgtttcccggcggtttcgt
aacattcggagcgtgaccctgaaggggaagccccggttcgcggacttcaatctggtcccc
gaccattggggctccgatgtccggccgtgggtggaggcgttcgccgccgagtacccgctg
ctggaggagctccggctgaagaggatgacggtgactgatgagagtctggagatgttgggt
gtttgttttggtgggttcaaagctctctcgcttgtcagctgtgatgggttcagcactgat
ggccttgccgccatcgccactcactccaagaatttgattgaacttgacatccaggagaat
caaattgatgagaaaagtggcagttggttaggttgtttccctgaaacattcacgtctttg
gaaatactgaactttgcaagcctgaattccgacgtcgattttgatgctcttgagaggctt
gtaaaaaggtgcatatcattaaaggtgttgaaggttaataaaaatgtaaccttggagcaa
ctgcagaggcttcttaccaatgctcctcaacttttggagctcgggaccggctcatttgcc
gtgcaagagatcgcagcctgtcagaattcacaattcttaagagcatttagcaattgcaag
aatttacacaccctctctggattatgggaagcaaccactctttatctcccagttgtatat
cctgcatgtactacaaatcttactttcttgaatttgagttatgctgctgctttgcaaagt
tgggaccttgctgagcttgttgcttattgcccacgtctccggcgcctttgggtactggac
acagtggaagaccaagggttgaaggctgttggatctaactgtcctttgcttgaggaactc
cgtgttttcccttctgatcctgatggtgatggtattatccgtggggtgactgaatcaggg
tttgttgctgtgtctcatgggtgcagaaaactccattatatcctctacttctgttggcag
atgactaatgcagctgtagcaaccgttgcacaaaattgccccgatatcacccactttcgt
ctctgcataatgatcccagggcaaccagattacatgacgaacgagcctatggatgaggct
tttggtgcagttgcgaagaattgcactaaactccaacggctttcagtgtcaggtttattg
actgaccatgccttcgaatacattgggaagtacgctaagaatttggaaaagctttcagta
gccttcgctggaaaaagtgatttggggatgcagtgtgtgctgaaaggttgtccaaagctc
aagaaacttgagataagggactgcccgtttgggaatgcagcttttctctcagatatagag
aagtatgaatccatgagatcactttggatgtcagcctgcaatgtgactataaacgcctgc
cggttattggcaagtcagatgccgagattgaacgttgaggtaatgaaggatgaaggggat
gatgactgtgtggctgataaagtttatgtttaccgttctgttgctgggccaagaagggat
gccccgccttttgttctcactttctga
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