Malus domestica (apple): 103446770
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Entry
103446770 CDS
T03194
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
mdm
Malus domestica (apple)
Pathway
mdm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103446770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103446770
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
103446770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
DUF1258
Zn_Ribbon_1
C1_1
ZnF_RZ-type
Motif
Other DBs
NCBI-GeneID:
103446770
NCBI-ProteinID:
XP_008384125
LinkDB
All DBs
Position
10:complement(join(42744806..42744898,42745037..42745246,42745350..42745568,42745855..42745989,42746347..42746462,42746914..42747296,42747459..42747610,42747903..42748061,42748168..42748341))
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AA seq
546 aa
AA seq
DB search
MSTTDLILRPECGGCKTTKDLYGSNCKHLTLCDDCGKKMALNRAKCNECGTVVTRLIREY
NVRASTANDKNYFIGRFVTGLPSFSKNKNSENKWSLHKDGLQGRQLSDAMREKYKNKPWV
LEDESGRSQYQGHLEGAQTATYYLLIKHPSGKEFSAIPAGSWFNFNKVAQYKQLTLEEAE
EKISNRKKTADGYERWMMKAANNGAALFGEVERLDKDNGGAGGKGRKKTAGGDDDEEGNG
SDRGDEDDDEELERKKRLNKRGGDGGDGDDDNEGVGGGDVDMDDDDIEKGDDWEHEEIFT
DDDEAVGNNPEEREDLEPEIPAPPEIKQDDEDEDEDDKEGGLSKSGKELKKLLGRSGGLN
DSDVEDDDDDDDDLDDDIGFPPALAPKQKDAPKEEPSDNSPSKPTPSASSRGTTPTSKSS
KGKRKSSGDDSKATNSAPPKKVKTENEQKSIKEEPVSVSASKSSAPPKGTPPVKTEPSSS
GGRVTEEEIRAVLMQRTPLTTNDLVSKFKGRLKSSEEKTAFSNILRRISKIKKGNGTSSY
IVLKER
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgaccgatttgatactgagacctgagtgtggcggatgtaaaacgaccaaggat
ttatacggaagcaattgcaagcacttgactctgtgcgacgactgtggcaaaaaaatggct
ctcaaccgcgccaagtgcaacgagtgcggcaccgtcgtcactcgcttaattcgagagtat
aatgttcgtgcgagtacggccaacgataagaactacttcattgggagatttgtgacgggg
ttgccgagtttttcgaagaacaagaattctgaaaataaatggtctctccacaaggatgga
ctacaaggacgccaacttagtgatgccatgcgggagaagtacaagaacaaaccatgggtt
ttggaggacgaaagtggccggtctcagtaccagggtcatcttgaaggtgcacagactgca
acttactacttactaataaaacatccctctggaaaggagttttctgctattcctgctggt
tcttggttcaatttcaacaaggttgcgcaatacaagcaacttacattggaagaagctgaa
gagaaaattagtaataggaaaaagactgcggatgggtatgaaagatggatgatgaaagct
gcaaataatggagctgctttatttggtgaagtggagaggcttgacaaggataatggtggg
gctggtgggaagggacgaaaaaagacggctggtggtgatgatgatgaagaaggaaatggc
tcagatagaggggatgaggatgatgatgaagagttggaaaggaaaaaaagattgaataaa
agaggtggtgatggtggtgatggtgatgatgataatgaaggtgtagggggtggtgatgtg
gacatggatgatgatgatatcgagaagggtgatgactgggagcacgaagaaattttcact
gatgatgatgaagctgttggaaacaatcctgaggaaagggaagatttggaaccagagatt
ccagctcctccagaaattaagcaggatgatgaggacgaggatgaagatgacaaggagggt
ggactgagcaaatcaggaaaagagttgaagaagctacttgggcgaagtggtggactgaat
gattcagatgtagaggatgacgacgatgacgatgacgatctggatgatgatattggcttt
cctccagcgctggctccaaagcagaaggatgcacccaaagaggaaccatctgacaacagt
ccctcaaaaccaacaccttctgcgtccagtcgaggaactacaccaacctccaaatcctca
aagggaaagagaaaatcaagtggcgatgattctaaggcaacgaacagtgcacctcccaag
aaggtcaagactgaaaatgaacaaaaatccatcaaagaggagcctgtgtctgtgtctgct
tctaaaagtagcgcgcctccaaaaggtactccaccggtgaaaacggagccatcgtcatct
ggtggacgcgtcactgaggaagaaatcagggctgtgttgatgcagagaacaccactcacc
acaaatgatcttgtttctaaatttaagggaagactcaaatcttctgaggaaaagaccgct
ttttcgaatattctaaggagaatttcaaagataaagaaggggaacggaaccagcagctat
atagtactgaaagagcgatga
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integrated database retrieval system
