Malus domestica (apple): 103446968
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Entry
103446968 CDS
T03194
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mdm
Malus domestica (apple)
Pathway
mdm04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103446968
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdm04040
]
103446968
Ion channels [BR:
mdm04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103446968
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Lipase3_N
IQ
Motif
Other DBs
NCBI-GeneID:
103446968
NCBI-ProteinID:
XP_008384360
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All DBs
Position
02:join(560926..560987,561446..562016,562233..562445,562628..562929,563123..563234,563328..563564,563685..564374)
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AA seq
728 aa
AA seq
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MLDCGYNKPQYLGGQRDKFVRLDDLDSRLSSPSDSGGRRCGFNIELTRTAPARDTSFKRG
MKKGSEGLKSIGRSLGFGISRAVFPEDLKGSDKKIYDPQDKFLLLWNKFFVLSCILAVSV
DPLFFYLPVINSSSTCLGIDRRLAIIATTLRMIVDAFYLIHMALQFRTAYIAPSSRVFGR
GELVIDPARIAKRYLRSYFIIDFLSVLPLPQIVVWRFLQRSKSSDVLATKQALLFIVLFQ
YIPRLLRVHPLTSELKRTAGVLAETAWAGAAYYLLLYMLASHIVGAFWYLLALERNDTCW
QKACTEIGKCDKKILYCGNQYILDPATWSNVTKTILSKCTADDQNTFFDFGIYNSALSSG
VVSSNKFIVKYCYCLWWGLQNLSTLGQGLATSTYPGEVIFSIALAIFGLILFALLIGNMQ
TYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLETRGVDEQSLVQSL
PKDLRRDIKRHLCLALVRRVPLFEDMDERLLDAICERLKPSLFTESTYIVREGDPVDEML
FIIRGRLESITTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGANLPSSTRTVKALTE
VEAFALVAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKILDL
RRKEEEAEAEALGGARSNAGGSYSIGATFLASRFAANALRGVHRNRNLKSARELVKLQKP
PEPDFSAD
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgttggattgtggttacaacaagccacagtacttgggaggccagagagacaagtttgtg
aggttagatgacttggactctagattatcatcaccttctgattcaggaggtagaaggtgt
gggtttaatattgaactaacaaggactgctcctgcgagggatacatcttttaagagagga
atgaaaaaggggtctgaaggacttaagtcaattggccgatcacttggatttgggatctct
cgtgcagtattccctgaagatcttaaggggtcagacaagaagatatatgatcctcaggac
aaatttctcctgctgtggaataaattttttgtcctctcatgtattctggctgtatctgtg
gaccctctgtttttctatcttccagtcatcaatagttcatcaacatgtcttggcatagat
cgaaggttggctatcatagcgaccacattgcggatgattgttgatgctttctatcttatt
cacatggctctccagttcaggacagcttacattgctccatcatctcgggtttttggaaga
ggtgaactggtgattgatccagcacgaatagcgaagcgatacttacgaagttatttcatc
attgattttctttcagtgctacccctaccacagattgttgtttggaggtttcttcagagg
tccaaaagttcagatgtgcttgctacaaaacaggctttgcttttcatagttttatttcag
tatattcccagacttcttcgagtccatcctttgacttcagagctgaaaagaacagctggc
gtccttgctgaaactgcttgggcaggcgctgcatactatttgctattatatatgctcgct
agtcatatagttggggcattttggtatttgttagccttagaacgcaatgacacatgctgg
cagaaggcttgtactgaaattggaaaatgtgataaaaagatcttgtactgcgggaaccaa
tacattttagatcctgcaacttggtccaatgttaccaaaaccatcttatcaaaatgcacg
gcagatgaccagaatacattctttgattttggaatctacaattcggctttatcatctggg
gttgtttcatccaataagttcatcgtcaaatactgttactgtttgtggtggggactacag
aatttaagtacacttggccagggtcttgcaaccagcacctatcctggagaggttatattt
tccatagcactggctatatttggactgatcctctttgcacttttgataggaaacatgcag
acctatcttcaatctcttactattcgacttgaggagatgagagtcaaaagacgcgattca
gagcagtggatgcatcaccgcttgctcccacaagaccttagggaacgcgtcaggcgatat
gatcaatataagtggttggaaacacgtggtgtggacgagcagagtttagttcagagtctt
ccaaaggatctcaggagagatatcaagcggcacctctgtttggcattagtgaggagggtt
ccactgtttgaggatatggacgagaggttgcttgatgccatttgtgagagactgaaacca
agtttattcacagagagtacttacatagttcgggaaggagatcccgttgacgagatgctt
ttcatcatacgtggtcgcctggagagcataacaacagatggtggtaggagtgggtttttt
aaccgcagtttactgaaggaaggcgatttctgtggtgaggagcttctaacttgggcactg
gatcccaaatctggtgctaacctcccatcatctactcggacggtaaaggctttaacagag
gttgaggcttttgcccttgtagccgaagagttgaaatttgttgccagtcagtttaggcgc
cttcacagtagacaggttcagcacaccttccgtttctactcacaacagtggcggacctgg
gctgcttgctttatccaagcagcatggcgccgctattccaagaggaaaatcttggatctt
cgtcgtaaggaagaggaagcagaagcagaagccttgggaggtgcccgcagcaatgctgga
ggttcgtatagtattggtgccacgtttttagcttctaggtttgctgcaaacgcacttcgt
ggtgttcaccggaacaggaatttgaagagtgctcgagaattagtcaaattacaaaagcct
ccggagcccgattttagcgctgattaa
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