Malus domestica (apple): 103447016
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Entry
103447016 CDS
T03194
Name
(RefSeq) protein HIRA-like isoform X1
KO
K11293
protein HIRA/HIR1
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdm03036
]
103447016
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
103447016
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_SCAP
Syntaxin_2
FadA
DUF1907
R3H-assoc
Motif
Other DBs
NCBI-GeneID:
103447016
NCBI-ProteinID:
XP_070662692
LinkDB
All DBs
Position
10:join(5667097..5667204,5668781..5669056,5669392..5669643,5669721..5670121,5670258..5671233,5671907..5672117,5672329..5672569,5672675..5672797,5673598..5673715,5673819..5674211)
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AA seq
1032 aa
AA seq
DB search
MISEKPSWIRHEGMQIFSIDVQPGGLRLATGGGDHKVRVWNMKSLGRDLDNEESAQRLLA
TLRDHFGSVNCVRWAKHGRFLASGSDDQVILIHERKPGSGTTEFGSGEPPDLENWKVSMT
LRGHTADVVDLNWSPDDLMLASGSLDNTIHIWNMSNGICTAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTDGHWQKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPVIVVKFNHSMYRRNISNAQEKAAPIGWTNGASKTGGK
EKEPQPYNVIAIGSQDKTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDG
SVATFHFDVKELGNRLSDAELDELKRNRYGDVRGRQANLAESPAQLLFEAASAKQASSKK
MVLEVQQNETVGKPSTEATVATITSADSLNKVSIAARISSPVKQREYRRPDGRKRIIPEA
VGVPLQQENISAGVQTQALDFPSECSDKNNDENGLIAADSGIKESSVRGVIGRSTEIKEG
HGVTARAMITKSLVIEKVPASTGGDESIAVEQSGNLKASSSAGSSCSTLSIRVFDRKEGE
DNVPICLEARPREHAANDIVGLGNTFIMKETEITCARGLQTLWSDRISGKVTVLAGNANF
WAVGCEDGCIQVYTTCGRRAMPTMMVGSAAIFIDCDERWKLFLVTRKGSFYVWDLFKQNC
LLHDSLASLVASNPNPSAKDAGVIKVISAKLSRSGSPLVVLATRHAFLFDMGLMCWLRVA
DDCFPGSNFASSWHSGSTPGGELAALQIDVRKYVARKPGWSRVTDDGVQTRAHLEAQLAS
SLALKSAKDYCQCLLSYIRFLAREADESRLREVCESFLGPPTGMVDDTTLDLNNSAWDPC
VLGMRKHKLLREDILPAMASNRKVQRLLNEFMDLISEYESAETNIEKKIQTSLTAHPPAA
DEMDSAPSRTNEMDIVPAATEKKKSVPASTDQKESSQLATDTENSAPVAEDKVNSDPPMI
SQVSVAAQDAGS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagagaagcccagttggattagacatgagggaatgcaaattttctccattgac
gttcaacctggtggacttaggcttgccactggtgggggtgatcacaaggtgcgggtatgg
aatatgaaatcccttggcagggatttggataatgaagaatcagcccagaggctacttgca
actctccgtgatcactttggttctgtgaattgtgttaggtgggctaaacatggtcggttt
cttgcatcaggatctgatgaccaagtgattctaattcatgagagaaagcctggttcagga
accactgagtttggcagtggagagccacctgaccttgaaaattggaaagtttcaatgact
ttgagagggcatactgcagatgtggtggatcttaattggtctccagatgacttgatgttg
gccagtggaagtttagataacactatacacatctggaacatgagcaatggtatttgcact
gctgttctgaggggtcactctagcctggttaaaggagttacttgggatccaattggctcc
ttcatagcaagtcaatcagatgataagactgtaattatttggcgaacaagtgactggagc
cttgctcacaggacagacggccattggcaaaaatcacttggatccacctttttcaggcgg
ctgggatggtccccttgtggccacttcattactaccactcacggattccagaaaccaagg
cattctgcacctgttctagagagaggggaatggtctgctacatttgacttcttaggacat
aatgcccctgtgatcgtagtgaagtttaaccattcaatgtataggaggaatatttccaat
gctcaggaaaaagctgcacccatcgggtggactaatggggcttcaaagacaggaggaaaa
gagaaagaaccacaaccttataatgtcattgctattgggagtcaggacaagactataaca
gtatggactactgcaagtccccgacctctctttgtagcaaagcatttctttactcaaagt
gttgtggatttatcctggagccctgatggctattcactttttgcatgttctttggatggt
tcggtggcaactttccattttgatgttaaagaacttggcaaccgtttaagtgatgctgaa
ctggatgaattgaagagaaaccgttatggagatgttagaggtcgccaagcaaatttagca
gaaagcccagctcagttattgtttgaagcagcatctgctaagcaagcctcaagcaaaaaa
atggttctggaagttcagcaaaacgagacagttggaaaaccttctactgaagcaacggtt
gcaacaataacttctgcagacagcttaaataaggtttcaatagctgccagaatttcaagt
cctgtgaagcagagggaatatagacgccctgatggtagaaagaggattattccagaagca
gttggggtgcctctgcagcaggaaaatatatctgctggggttcaaacccaggcacttgac
ttcccttctgaatgttctgataaaaacaatgatgagaatgggttaattgctgctgatagt
ggcatcaaagaaagttctgttaggggagtaattggcagaagcactgaaataaaggaagga
catggggttactgctagagctatgattaccaagagccttgttattgagaaggttcctgct
tccacaggtggagatgaaagcatagctgtggaacagtcaggtaatttgaaggcgtctagt
tcagcaggttcttcatgttccactctttcaattagggtgtttgataggaaagaaggggaa
gacaatgtaccaatatgcttggaagctcgacctagggaacacgctgcaaacgacatcgtt
ggcttgggaaatacatttatcatgaaagaaacagaaattacttgcgcaagagggttacag
actctttggtcagataggatatctgggaaagtcactgttttagctggaaatgcaaacttc
tgggctgttgggtgtgaagatggatgcatacaggtttacacaacttgcgggagacgtgct
atgccaactatgatggtaggatctgcagcaatatttatagattgtgacgagcgctggaaa
ttatttttggtcacaagaaaaggatccttttatgtatgggatctattcaagcagaattgt
ctcctccatgactcattggcatctctggtcgcttcaaacccaaacccatctgcaaaagat
gcaggcgtgatcaaagttatatcagcaaagctatcaagatctggttctcctcttgttgtt
cttgccactcgccatgccttcctctttgacatgggcctgatgtgttggcttagggttgca
gatgactgctttcctgggtcaaattttgcaagctcctggcattcaggttcaactccgggt
ggtgagctggctgctttgcagattgatgttaggaagtatgtggccagaaagccaggttgg
agcagggtgacagacgatggggtgcagacacgtgctcacttggaggctcagttggcttcc
tcgctagctttaaagtcagccaaagactattgccaatgccttctatcatatattcgcttc
cttgcaagagaagcagatgagtctcgtttacgagaagtgtgtgagagtttccttggacct
ccaactgggatggtggacgatacaactttagatttaaacaactcggcatgggatccttgt
gtgcttggaatgaggaaacataaacttttacgagaagatatccttccggcaatggcttca
aatagaaaagtacagagattgcttaatgaattcatggatctcatttccgaatatgaaagc
gctgaaacaaatatagagaaaaagattcaaacttcgctgacagcacatccaccagcagct
gatgaaatggactctgctccttccaggacaaacgaaatggacattgtccctgcagcaaca
gagaaaaagaagtctgttcctgcttcaactgaccaaaaggagtcttcccagttagcaaca
gatacagaaaattctgctccagtagccgaagacaaagttaattcagatccgccaatgatc
agtcaagttagtgttgctgcacaagatgcaggttcttga
DBGET
integrated database retrieval system