KEGG   Malus domestica (apple): 103447022
Entry
103447022         CDS       T03194                                 
Name
(RefSeq) LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 3
  KO
K14948  polypyrimidine tract-binding protein 2
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdm03041]
    103447022
Spliceosome [BR:mdm03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    103447022
SSDB
Motif
Pfam: RRM_5 RRM_1 RRM_8 RRM_occluded RRM_PARP14_3 TGF_beta
Other DBs
NCBI-GeneID: 103447022
NCBI-ProteinID: XP_008384421
LinkDB
Position
13:complement(join(35824635..35824977,35825600..35825743,35825820..35825927,35826709..35826722,35826814..35826871,35826975..35827026,35827127..35827168,35827288..35827337,35827425..35827489,35827822..35827945,35829512..35829593,35829759..35829835,35829934..35830005,35832392..35832448))
AA seq 429 aa
MTEPSNVIHVRNVGHEISENDLLRLFQPFGVITKLVMLRAKNQALIQMQDTTAAVSALQF
YANVQPALRGRNVYVQFSSHQELTTMYQNAQGRGNEPNQILLVTIHHMLYPITVEVLHQV
FSPHGFVEKIVTFQMSAGFQALIQYQSRQSAIAARTALQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDFTNPNLPSEQIGRSPQPGYGDAGGMYGLQGTGASAVGFPQMTNAAAIAE
AFGGGLPPVISGTNDWCTVLVSNLNPDKIDEDKLFNLFSIYGNIVRIKLLQNKPDHALVQ
MGDGFQAELAVHFLKGALLFGKRLEVNFSKHPNIMQGADTHEYVNSNLNRFNRNAAKNYR
YCCSPTKMIHLSSLPQEVTEEEIVSHLEXKQALVMFETEEQATEAFVCKHATSLGGSMIR
ISFSQLQAI
NT seq 1288 nt   +upstreamnt  +downstreamnt
atgacagaaccttctaatgtcattcatgttcggaacgtggggcatgaaatttctgaaaat
gatttgcttcggctatttcagccatttggagtcataactaagcttgtgatgcttcgtgca
aaaaatcaggctcttatccaaatgcaagatactactgctgcagtcagtgcactgcaattc
tatgcaaatgttcagcctgccctaaggggaaggaatgtatatgtccagttctcctcacat
caagaactgacaacaatgtaccagaatgctcaaggacgaggaaatgagccaaaccaaatt
ctgttagttacaattcatcacatgctatatcctattacagtggaagtcctgcatcaagtg
ttttctcctcatggatttgtagagaagatcgtcacttttcagatgtcagctggttttcag
gccctaattcagtatcaatcccgacagagtgctattgctgctagaactgctctgcaggga
cgtaatatttatgatggttgttgtcaactagacattcagttctcaaaccttgacgaatta
caagtgaactacaataatgaacgttcaagggatttcactaatcccaatttgccttcagaa
cagataggaagatccccgcaacctggatatggtgatgcaggaggcatgtatggccttcaa
ggtactggagccagcgcagttggatttccgcagatgactaatgcggctgcaattgcggaa
gcctttggtggaggtttgcctcctgttataagtggaaccaatgactggtgtacagtcctc
gtctccaatctgaatcctgataaaatagatgaggacaaactttttaacctgttttccatc
tatggaaacattgtgagaattaaacttcttcaaaacaagcccgaccatgcacttgtccag
atgggtgatggctttcaggctgaactggcagtacactttctaaagggtgcactactgttt
gggaagcgattggaggtcaacttctcgaagcatccaaatataatgcaaggtgctgacaca
catgaatatgtgaactcaaatctcaaccgcttcaaccgtaatgcagcaaagaactaccgg
tattgctgctctcctacaaagatgatccacttgtcttctcttccccaggaagtcaccgaa
gaggagattgtgagccacctggaggaagcaggccttggttatgtttgaaactgaggagca
ggccactgaagcatttgtatgcaagcatgctacctcgctcggtgggtcaatgattcggat
ctccttctcgcagctacaggcaatatga

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