Malus domestica (apple): 103447435
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Entry
103447435 CDS
T03194
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00730
Thiamine metabolism
mdm01100
Metabolic pathways
mdm01240
Biosynthesis of cofactors
Module
mdm_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
103447435
Enzymes [BR:
mdm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
103447435
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
103447435
NCBI-ProteinID:
XP_070664753
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Position
11:complement(join(6657399..6658906,6659107..6659234,6659364..6659674))
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AA seq
648 aa
AA seq
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MASVHSALTSVVCKNGSHSSAAKFPATTFLPGFDAVGRLSSPFKKEVCLSSLSSGAKATL
TFDPPATNSEKPKLPRHTADPASPDFLPLPSFEQCFPKSTKEHREVVHEETGHVLKVPLR
RVHLAGDEPPFDNYDTSGPQNISPRVGLPKLRKDWIERRDKLGAPRYTQMYYAKQGIITE
EMLYCAAREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRKFLVKVNANIGNSAVVS
SIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSPVPVGTVPIYQALEKVDGIA
ENLNWEVFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYH
KENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKD
VQVMNEGPGHVPMHKIPENMKKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGA
LGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPHAQAWDDALSKARFEF
RWMDQFALSLDPMTAMSFHDETLPADGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYG
SAEEAVIRGMDAMSAEFLAAKKTVSGEQHGEVGGEIYLPESYIKAAER
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggtgcatagtgccctgacatcggttgtgtgcaagaatggcagtcattcttct
gcagcaaagttcccagctaccaccttcttgcccgggtttgatgccgtggggcgtctttca
agcccgttcaagaaggaagtgtgccttagttccctgagctcaggtgccaaagctacactt
acctttgatcccccagcaaccaattccgagaaacccaagctaccaaggcatacagccgat
cccgcttctcctgattttctgcctcttccgtcctttgaacaatgttttcccaagagcaca
aaagaacacagggaagttgttcacgaagaaactggccatgtgctcaaagttccccttcga
cgagtccacctggctggggatgaacctccattcgacaactatgacactagtggtccacaa
aacataagcccgcgcgttggtctccctaaactgcggaaagattggattgagaggcgagac
aaattaggtgcaccaagatacactcagatgtactatgctaagcagggaattataactgag
gagatgttgtactgtgctgctcgtgagaagcttgacccagagtttgtgagatcagaagtg
gctcgtgggcgggcaattatcccttccaataagaagcacttggagctggagccaatgatc
gttgggagaaaatttctggtcaaggttaatgcaaacataggaaactctgctgttgtcagc
tctatcgaagaggaagtttataaagtccagtgggcaactatgtggggtgctgacactgtc
atggatctgtctacaggacgtcacatccatgagacccgtgagtggatcctacgtaactcc
cctgtgccagtagggacagtacccatttatcaagcgcttgaaaaagtggatggaattgca
gaaaacctgaactgggaagtgttcagagaaactcttattgaacaagccgagcagggtgta
gattacttcaccatccatgccggggttctactgcggtacatcccactaacagcaaagcgt
atgacaggaattgtttcacgaggaggatccattcatgcaaagtggtgcttagcttatcac
aaagagaattttgcttatgagcactgggatgacatactcgacatctgcaatcaatatgat
gtcgccctgtcaattggtgacgggctgagacctggttcgatttatgatgctaatgacact
gcacagtttgcagagctgttaactcagggagaactgacccgtagggcatgggaaaaggat
gtgcaggtaatgaatgaagggccagggcatgttccaatgcacaagattccggaaaacatg
aaaaaacagcttgaatggtgtaatgaagcgcctttctacactcttggtcctctaacaact
gatattgctcctggatacgatcacatcacctctgccattggtgctgccaacattggggct
ctaggcaccgcccttctctgttacgtaaccccgaaggagcatctgggattgccaaaccga
gatgatgtgaaggctggagttatagcatataagatagctgctcatgccgctgatctagcc
aaaggtcacccacatgctcaagcctgggatgatgcattgagcaaggcaagatttgagttc
cggtggatggaccagtttgccttgtcactagaccctatgactgccatgtcattccatgac
gaaaccctgccagcagatggtgccaaggtggcccatttttgctccatgtgcggtccaaag
ttctgttcaatgaagataacggaggatgtgaggaagtatgctgaagagcatggttacggg
agtgctgaggaagctgtgatccgtggaatggatgctatgagtgctgagtttcttgctgcc
aagaaaactgtgagcggggaacagcatggtgaagttggaggggaaatttacttgccagaa
agttatataaaagctgccgagaggtga
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