Malus domestica (apple): 103447514
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Entry
103447514 CDS
T03194
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103447514
04121 Ubiquitin system [BR:
mdm04121
]
103447514
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103447514
Membrane trafficking [BR:
mdm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103447514
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103447514
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING-like
Rad50_zn_hook
zf-RING_16
DpnI
Zn_ribbon_FGT1_2
Prok-RING_4
DUF7563
zf-HC5HC2H_2
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
103447514
NCBI-ProteinID:
XP_008384934
LinkDB
All DBs
Position
11:7802083..7803183
Genome browser
AA seq
366 aa
AA seq
DB search
MAMPSPPPTASYWCYRCTRFVRVFALDSALSCPHCETGFLEEIETMPQPLPQPNYLRRRF
PSSHRHDDEPGQTPTPASRRVRRASGDRSSPFNPVIVLRGTEANTDSNSFELYYDDATGS
GLRPLPPTMSEFLMGSGFDRLLDQLSQIEITGLGRPENPPASKSAVESMPVILIAETHVV
SDSHCAVCKEAFELGSEAREMPCKHIYHPDCILPWLSMRNSCPVCRHELPADQNNRNSDP
GLEEEAMGLTIWRLPGGGFAVGRFSGGRRPGERELPVVYTEMDGGFNGNGAPRRVLWASR
SRGSERVGIRRAFRNIASFWGRLRTNSSSSRSGSDSEPGSGLTRSQSSSVFGRFVNRRGR
AWALDE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggccatgccatcgccgccgccgacggcgtcgtattggtgctacagatgcactcgcttc
gtccgagtgtttgccctggactccgccctctcgtgcccccactgcgaaaccggcttcctc
gaggagatcgagacgatgccccagccgctgccgcagccgaactatctccgccgtagattc
ccgtcatctcaccgccacgatgatgaaccgggtcaaaccccgactcctgcatctcgccgg
gtccgacgagcatccggcgaccggtcgtcaccttttaacccggtcatcgttctacgtggc
actgaagccaataccgattccaactcattcgaactctactacgacgacgctaccgggtcg
gggctccgtcccctcccgcccaccatgtccgagtttttaatgggctcgggattcgaccgt
ttactcgaccagctttcccagatcgaaatcaccggtttgggccgacccgaaaacccgccc
gcatctaagtccgccgtggaatctatgcccgttattctaatcgccgaaactcacgtcgtt
tcggattcacactgcgccgtctgcaaagaagcattcgaactcgggtcggaggcccgggaa
atgccgtgcaagcacatataccacccggattgcatccttccctggctctcgatgcgaaac
tcctgcccggtttgccgacacgagctacccgctgaccaaaacaaccgtaattcggatccg
ggtctcgaggaagaggccatggggttgacaatctggagattacccggcggcggtttcgcc
gtggggaggttctccggcggcagaagacccggcgagagggaattaccggttgtgtacacg
gaaatggacggcgggttcaatggaaacggggctccgagaagggtactatgggcatcgagg
agtagagggagcgaaagggttgggattcggagggcttttcgtaatatagcttcgttctgg
gggcgattacgtaccaattcatcgtcttcgaggtccggttcggattctgaacccgggtcg
ggtttgactagaagtcagtcaagttcggtgtttgggcggttcgtaaaccggcgtggcagg
gcgtgggcgttggatgagtag
DBGET
integrated database retrieval system
