Malus domestica (apple): 103447717
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Entry
103447717 CDS
T03194
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103447717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103447717
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103447717
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
U-box type E3
103447717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
MLKL_N
zf-RING_UBOX
Arm_2
zf-Nse
zf-C3HC4_4
HEAT_EZ
Neurochondrin
KAP
MCAfunc
zf-C3HC4_2
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
103447717
NCBI-ProteinID:
XP_008385130
LinkDB
All DBs
Position
11:join(9556922..9557281,9559854..9559970,9560337..9560792,9561215..9562363)
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AA seq
693 aa
AA seq
DB search
MSTLRQLQTSANPEPPQNGAVVAEIGGDVAMEEDRGALVQSLIDTVNEIASISDYKCTVK
KQYCNLARRLKLLTPMFEEIRDSKEVVSQETLKALLSFMEALKSAKELLRFGSESSKIYL
VLEREQIMMKFHEVTARLEQALSGISYENLDISDEVKEQVELVLAQFRRAKGRFDSPDVE
LYGDLLSLYSKNEAATDPAVLRRLVDKLELTGIAELTQESLALHEMVTFSGGDPGESIEK
MSMLLKKIKDFVQTENPDMDAPAGGKNILASCSGQASTDKNHKVPPVIPDDFRCPISLEL
MKDPVIVSTGQTYERSCIEKWLEAGHATCPKTQQSLFNTTLTPNYALRSLIAQWCEANGI
EPPKRPNSRPIKTTSSCSPAERTKIEILLRKLMSVSPEDQRSAAGEIRLLAKRNADNRVA
IAEAGAIPLLVGLLSTPDSRTQEHAVTALLNLSICEENKGSIITSGAIPGIVHVLKNGGM
EARENAAATLFSLSVVDENKVRIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGN
KGKAVRAGVVSTLMKLLTEPGGGMVDEALAILAILSSHAEGKAAIGAAEAVPVLVEVIGT
GSPRNRENAAAVLVHLCSGDQQHIVEAQELGVMTSLLELAQNGTDRGKRKAAQLLERMNR
FAEAQAQAQAQAQPDDQSETQSHPPTTPNAVDG
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccctccgtcaactccagacctccgcaaacccagaacccccacaaaacggtgcc
gttgtggctgagatcggcggcgacgtagctatggaggaagacagaggcgctctggtgcag
agcctgatcgacacggtcaacgaaatagcttcgatctccgactacaagtgtacggtcaag
aagcagtactgcaatttggcgaggaggttgaagctgctgaccccaatgttcgaggagatt
agggatagcaaggaggtggtttctcaggagactttgaaagccttgctttcgttcatggaa
gctctgaaatcggccaaggagctgctcagattcggaagcgaaagcagcaagatttacctg
gttttagaaagggagcaaattatgatgaagtttcatgaggtgacagctcgattggagcaa
gctttaagtggaatctcctatgaaaatcttgacatatcagatgaagttaaggaacaggtt
gagcttgttcttgctcagtttagaagagccaaagggaggttcgattcgcctgatgttgag
ctctatggagatctcttatccctttacagtaaaaatgaggcagcaacagatccagctgtc
ctaagaagattggttgataagttagaattgacaggtatagctgaactcacacaagagtca
ctagccttgcatgagatggttactttcagtggtggggatcctggggagagcatcgagaag
atgtcaatgctactgaaaaaaattaaagattttgtacaaacagaaaaccccgacatggat
gctcctgcagggggaaagaatatattagcaagctgcagcgggcaagcatccaccgacaag
aatcacaaagtccccccagttataccagatgattttcggtgtccaatatctttggagtta
atgaaggaccccgtcattgtttcaacagggcagacatatgagcgttcctgtattgagaag
tggctggaagcagggcatgcgacatgtccaaaaacacaacaaagcctctttaacaccacc
ctcacaccgaactatgctttacgtagcctcatagcccagtggtgtgaggcaaatggcatt
gaaccaccaaaaagacccaattctcggcctattaaaactacatcctcctgctctccagca
gaacgcactaagattgaaattctcctccgcaagctgatgtctgttagccccgaagatcaa
aggtctgctgcgggtgaaatccggcttcttgccaaacgtaatgcagacaatcgtgtggct
attgctgaagctggtgcaatacccctgcttgtaggcctcctttcaacccccgactcccgt
acccaagagcatgctgtcactgcactcctcaacctttccatatgtgaggagaacaaagga
agcatcataacctctggagcaattcctggtattgttcatgtcctcaagaatggaggcatg
gaagcacgggaaaatgcagctgcgaccctttttagtctttctgtcgtggatgaaaataaa
gtcagaattggtgcttcgggagccattccgccacttgttacattgctgagtgaaggtacc
caaagggggaagaaagatgctgcaactgcactttttaacttgtgcatttatcaaggtaac
aaggggaaggcagtaagggccggtgttgtttcgaccctaatgaagctgctgacagaacct
ggaggtggaatggtggatgaagcactggccattctagcaatactctctagccatgctgaa
gggaaagcagccattggagctgctgaggcagtgcctgttttggttgaagttattgggaca
ggatctccccgaaacagagaaaatgcagccgcggttttggtgcatctttgttctggagac
caacaacatatagtagaggctcaggaacttggggtgatgacttcgttattggagttggct
caaaatggcacagatagaggcaagagaaaggctgcacagttgcttgagcgaatgaatcgg
tttgctgaggcgcaggcacaggcacaggcacaggcacaacctgatgatcaatctgagacc
cagtcacatccacccaccactccaaatgccgttgacggatga
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integrated database retrieval system
