KEGG   Malus domestica (apple): 103448028
Entry
103448028         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K23288  syndetin
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103448028
Membrane trafficking [BR:mdm04131]
 Protein recycling
  Others
   EARP complex
    103448028
SSDB
Motif
Pfam: Vps54_N Syndetin_C TetR_C_30
Other DBs
NCBI-GeneID: 103448028
NCBI-ProteinID: XP_008385482
LinkDB
Position
11:complement(join(13981673..13981774,13981868..13981918,13982047..13982124,13982224..13982343,13982995..13983067,13983662..13983724,13983875..13983945,13984617..13984742,13985207..13985361,13985483..13985585,13985696..13985759,13985875..13986404,13986927..13987487,13988005..13988137,13988229..13988257,13989944..13990066,13990890..13990973,13991592..13991678,13991791..13991880,13992025..13992114,13992297..13992361,13993473..13993551,13994517..13994591,13996108..13996275,13996689..13996913))
AA seq 1114 aa
MQPNLSPFGSVLANPFLFNGDLSEGIETPGVLFLVPFFLFQGGAMDLSKVGEKILSSVRS
ARSLGLLPSASDRPEVPARAAAAAAVARAIAGLPPHQRFSLSSSSEELSSIYGSKHHGQE
VEEIEEEFYEENFDPVRHILEHIPSEESELAYFEKQAALRLAQLDRVAERLSRNVMEHHE
VMVKGMHLVRELEKDLKIANVICMNGRRHLTSSRNEVSRDLIVNSNSKKKQALLDMLPVL
TELGHALKMQAELESLVEEGNYCKAFQVLSEYLQLLDTFSDLSAVQEMSRGVEVWLGKTL
QKLDSLLLGVCQEFNEEGYITVVDAYALIGDISGLAEKIQSFFMQEVLSETHSILKNIVQ
EEDQGFHMQNSRLTYSDLCLQIPEPKFRQCLLNTLAILFKLMCSYHEIMGFQLDNRDSAG
KTPSMTQKESDISPTPGGVQQISPPCSSQKVNGSLAESVDIVPGSAYIDESTTTCSLVEP
AGNTTSTNYQNLVDEASKDDSTTSTSGSPWYQLRKDATAFVSQTLQRGRKNLWQLTATRV
SVLLSSASVSSASIHQFLKNYEDLGVFILAGEAFCGIEAADFRQKLKAVCENYFLAFHRQ
NIHALKMVLEREIWLILPPDTVQEITFPGLAGDGAPIIVPSEGNSNARVLHSDKSTRVVD
TGAKKSGFSNWLRNGNPFLLKLAHTSKEGLKWNSTTGESDGNFSERLGDKVSPQNSDSSH
SNGANFVSEEENEDLLADFIDEDSQLPSRISKPRLSRNQSLHYNDGEIIAQTGSSICLLR
SMDKYARLMQKLEIVNVEFFKGICQLFEVFFHFVFETFAQQNNNAGGKGSPDPINYRLKT
ALSRIQQDCDQWIKSPSSSSTSLNSSYTDITPMSPPSNTPGTSFGLKERCAGADTITLVA
RILHRSKAHLKTMLLQNNAAVVEDFYAHLVDAVPYLVEHIHRTTARQLLHINGYVDRIAN
AKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIRKEVQDLLLEYGLEIVAQTLIEGLS
RVKRCTDEGRALMSLDLQVLINGLQHFVAMNVKPHLQIVEAFIKAYYLPETEYVHWARAH
PEYTKNQIVGLINLVATMKSWKRKTRLEVLEKIE
NT seq 3345 nt   +upstreamnt  +downstreamnt
atgcagccgaatctgtctcccttcggcagcgttttggcgaatccgtttttgttcaatggc
gatttgagcgagggcattgagactcctggggttttgttcttggtccccttttttctgttc
caaggtggtgcaatggatttatcaaaggtcggcgagaagattctgagctccgttaggtct
gccagatcgctcggccttctcccttctgcttctgatcgaccagaggttcccgcacgagct
gcagctgccgcagctgttgctcgtgctattgctggactgcctccgcatcaaaggtttagt
ctatcatcaagctctgaagaattgagctcgatatatggaagcaaacatcatggtcaagaa
gtagaggagatagaggaagaattctatgaagagaattttgatccagtcagacatattttg
gagcatattccatctgaagaaagtgagctcgcttattttgagaaacaggccgctcttaga
ttggcacaactggatagagtagctgaacgtttatcccgcaatgttatggaacatcatgaa
gtaatggtgaaggggatgcatttggtcagggaattggagaaagacttgaaaattgcaaat
gtcatctgcatgaatggaaggcggcatctgacctcatcaaggaatgaggtttctagggat
ctcatcgtaaattccaattccaaaaagaaacaagctcttctggacatgcttcctgtttta
actgagcttggtcatgcactgaaaatgcaagcagagctcgagtctctggttgaggaagga
aattactgcaaggcctttcaagtcctgtctgaatatctacagctgttagatactttttca
gatctttctgcagtacaagagatgagccgtggtgtagaggtttggctgggaaaaactctt
caaaagctggattccttgttgctaggagtgtgccaggagttcaatgaggagggctatata
actgtggtcgatgcttatgcactaattggggatatctctggccttgctgagaagatacaa
agtttctttatgcaggaagttctatcagaaacccactctatattgaagaatattgtgcaa
gaggaggatcagggatttcacatgcaaaatagtcgacttacctacagcgatctatgcctt
cagatacctgaaccaaagtttaggcagtgtttgttaaacacactagctatccttttcaag
ttgatgtgttcatatcatgaaatcatgggctttcagctggataatagggattcagccggt
aaaactccaagcatgacacagaaggaaagtgacatctctccgactcctgggggggttcag
caaatttcacctccttgttcttcccaaaaagttaatggctctcttgccgaatctgtagat
atagtgcctggttcagcgtacatagacgaatctacaaccacctgctctttggttgaacct
gcaggaaacacaacttccactaattatcaaaatttagttgatgaggcaagtaaggatgac
agtacaacatcaacaagtggatccccatggtatcaattacggaaagatgccacagcattt
gtttcacaaacccttcagaggggacgcaaaaatctttggcaactcacagctactcgtgta
tcggtcttgctttcttcggcttctgtttcttctgctagcatacaccaattcttgaaaaac
tatgaagatctgggtgtctttatcttggctggggaagcattttgtggaattgaagcagct
gacttcaggcagaagttgaaggcagtatgtgaaaattattttttagcttttcatcggcaa
aatatacatgcgcttaaaatggtgttggaaagagaaatttggttgatactgccaccagat
acagtacaagaaattacatttcccgggcttgccggtgatggagcacctataattgttcca
tctgagggtaattctaatgctagggttctacattctgataagtctacaagagttgttgat
actggtgccaagaagagtggattctctaattggctaagaaatggaaacccctttttgtta
aagctggcacatacatccaaagaaggtcttaagtggaacagtacaactggtgaatctgat
ggtaattttagtgaaaggcttggtgataaggtctctccacaaaacagtgattcaagtcat
tctaatggtgctaattttgtttcggaagaagaaaatgaagatcttcttgcagactttatt
gatgaggatagtcaactcccaagtcgaatttcgaaacctagactgtcaagaaatcaatct
ttacattataatgatggagaaatcatagctcagactggatcatctatttgtcttctaagg
tcaatggataaatatgccaggcttatgcagaaattggaaatagtcaacgttgagttcttc
aagggaatatgccagttgtttgaggtattttttcattttgtgtttgaaacatttgctcag
caaaacaacaatgcaggtggaaaagggtcacctgatccgattaattatcggctgaagaca
gccttgtccagaatacaacaagactgtgaccagtggataaagtccccgtcatcttcatcc
acatctctaaattcgtcatatacagacatcacacctatgagtcctcccagtaacacacca
ggaacatcctttggtctcaaggaaagatgcgcaggtgctgacactatcacccttgttgct
cgaatattgcatagatctaaagctcatctcaagacaatgctacttcagaataatgctgct
gtggttgaagacttctatgcacatctggttgatgctgtaccatatcttgtagagcacatt
cataggacaactgcaagacaactgctccatattaatggttatgtggatcggatagccaat
gcaaaatgggaagtgaaagagcttggactagagcataatgggtatgttgatttgttattg
ggagaattcaagcactataaaacaaggcttgctcatgggggaattcgcaaggaggttcaa
gacctcctcttagaatacggacttgaaattgtggcccaaactctcatagaaggactctcc
cgtgtcaagaggtgtacagatgaagggcgggctctcatgtcattggatctacaggttttg
atcaatggcttgcagcattttgtggcaatgaacgtgaagccccatttacaaatagttgaa
gccttcattaaggcatactatcttccggaaaccgaatatgtgcactgggcacgtgctcac
ccggaatacacaaaaaatcaaattgttgggttgatcaaccttgttgccactatgaaaagt
tggaagagaaaaaccagactggaagtgctagaaaagattgaatga

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