Malus domestica (apple): 103448152
Help
Entry
103448152 CDS
T03194
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Module
mdm_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103448152
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103448152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
PITH
Motif
Other DBs
NCBI-GeneID:
103448152
NCBI-ProteinID:
XP_028945211
LinkDB
All DBs
Position
11:complement(join(21539829..21540050,21540155..21540277,21540374..21540482,21540591..21540672,21540806..21541190,21541313..21541453,21541546..21541620))
Genome browser
AA seq
378 aa
AA seq
DB search
MGAQENTFNVIDYGAVGNGQADDSIAFLKAWGALCVSTTRGIATLVVPKSKTFLLNSVAF
QGPCRSSNINFQIQGSIIAPNNIGAWKNKDKWIQFANVPGLMINGGGRIDGNGAGWWKLC
GNKKSHCQRPTSLHIHKCDGFLLSRLTFLNSPKNHISINSCNGGRVFGLLISAPKESPNT
DGIDISSSTKLTIHNSLIATGDDCIAINSGSSFIKINGVKCGPGHGISIGSLGQNGEHSA
VEEIQVSNCSFRGTQNGMRIKTWEGGSGYARKITFEGITFTDIENPIIIDQHYFANPTSV
MDINKCVQVSDVTFRNIAGSSGVSQAITLDCGQNCCTNIIMDNVNIRSGVPNKDVYAYCN
NAQGTSSFSTPYVPCLSH
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgcaagaaaatactttcaatgtgattgattatggtgctgttgggaatggccaa
gctgatgattcaattgccttcctcaaagcatggggagctctgtgtgtatcaacaactcga
ggcatcgctaccctggttgtaccgaaaagtaaaacattcttgttaaattccgtggctttc
cagggtccttgcaggtcaagtaacataaatttccagatacaaggaagtattattgctcca
aataacattggtgcatggaaaaacaaggacaaatggattcagtttgcgaatgtgcccggt
cttatgataaacggcggaggtcgaatagatggcaacggtgccggttggtggaaattatgc
gggaacaagaaatcacactgccagcgaccaactagtctccacatccacaaatgtgatggt
ttcctgctgagtcgcctcacattcttgaacagccccaagaatcatataagcatcaacagc
tgcaatggtggccgggttttcggactcttaattagtgctccgaaagaaagccctaacact
gatggaattgatatttcttcatccaccaaacttaccattcacaattctcttattgcaact
ggcgatgactgtattgccatcaatagtggttcatcttttatcaagattaatggtgttaaa
tgtggaccaggccatggtattagtattggaagtcttggtcaaaatggagaacatagtgca
gtggaagagattcaagtaagcaattgcagtttcagaggcacccaaaatggaatgagaatc
aagacatgggaaggcggctcaggatatgcgaggaagatcacctttgagggaattacattt
acagacattgagaacccaatcataatagaccagcactattttgctaatcctacttcagta
atggacataaacaagtgcgtacaagtgagcgatgtgacattccgtaacattgctggatct
tccggtgtttcgcaagcaattacattggactgtggacagaattgctgcaccaacattata
atggataacgtcaatataagatcgggtgttccaaacaaggatgtttatgcatactgcaac
aatgcccagggcacctcttccttctccacgccttacgtcccctgcctttcccattag
DBGET
integrated database retrieval system
