KEGG   Malus domestica (apple): 103448303
Entry
103448303         CDS       T03194                                 
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
  KO
K12882  nuclear cap-binding protein subunit 1
Organism
mdm  Malus domestica (apple)
Pathway
mdm03013  Nucleocytoplasmic transport
mdm03015  mRNA surveillance pathway
mdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103448303
  09122 Translation
   03013 Nucleocytoplasmic transport
    103448303
   03015 mRNA surveillance pathway
    103448303
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103448303
   03041 Spliceosome [BR:mdm03041]
    103448303
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     103448303
Spliceosome [BR:mdm03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    103448303
SSDB
Motif
Pfam: MIF4G_like MIF4G_like_2 MIF4G TPR_MLP1_2 DUF5798
Other DBs
NCBI-GeneID: 103448303
NCBI-ProteinID: XP_028944661
LinkDB
Position
11:join(25204835..25204918,25205051..25205110,25205644..25205700,25206545..25206616,25207773..25207835,25208693..25208869,25209731..25209862,25213968..25214034,25214165..25214364,25215594..25215664,25216569..25216653,25217666..25217734,25217838..25217956,25219665..25219803,25219972..25220472,25222522..25222821,25222989..25223167,25223454..25223565,25223750..25223857)
AA seq 864 aa
MSSWKSLLLRIGEKSSDYGTSDDVKEHIETCYGVLRRELEHSPDDVSQFLIQCAEQLPHK
SPLYGTVIGLLNLENEEFIRKVVENTQTNFQDALASGNCNKIRILMRFLTVMMCSKVIHP
SSLVVVFETLLSSAATTVDEEKGNPSWQSRADFYITCILSCLPWGGAELIEQVPEEIERV
MVGVEAYLSIRKHSSDTGLSFFEDDDENAREPSDKDFLEDLWGRIQVLSSNGWKLDSVPR
PHLSFEAQLVAGKSHEFGPISCPDQPAMPSTMSNITYGKQKHDAEFIYPQRIRRLNIFPE
SKTEDVQPMDRFIVEEYLLDVLFYLNGCRKECASYMAGLPVPFRYEYLMAETIFSQLLML
PQPPFRPIYYTLVIIDLCKALPGAFPAVVAGAVRALFDKIADLDMECQTRLILWFSHHLS
NFQFIWPWEEWAHVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIEHAPGLEELLPPK
GAPNFKFSVEETSEGNELNALSSDLRNMVKARASAREMIVWIEESVFPVHGMEVTLNVVV
QTLLDIGSKSFTHLITVLERYGQVIAKLCADQDKQVMLINEVDSYWRNNSQMTAIAIDRM
MGYRLLSNLAIVRWVFLPANIEQFHISDRPWEILRNAVSKTYNRVCDLRKEISSMKKSVV
SAEEAAATVKAELEASESKLSLMDGEPVMGENPGRLKRLKSRAEKAKEDAVSVRESLEAK
EALLARSLDEFEALFFSLYKNFLNALTERLPEASKCVTLQGLKGIHADSMAVDHEESSAM
DLDNENRIPKKSELNGGKTSNVYNVGEKEQWCLSTLGYLKAFSRQYASEIWPHMEKLDEE
VLTEDVHPLIRKSVYCGLRRATDG
NT seq 2595 nt   +upstreamnt  +downstreamnt
atgagcagttggaagagtcttcttcttcgaattggcgaaaagtcttccgactatggcacc
tccgacgacgtcaaagaacacattgaaacttgctatggcgtgcttcgtcgagaattggag
cactctcccgacgacgtttcgcaattccttatccagtgtgctgaacagttgcctcacaag
agtcctttatatggaacagtgattggcttgttaaatttggagaacgaggaatttattagg
aaagtagtggagaacactcaaactaattttcaggatgctttagcttccggaaattgtaac
aagattcgtattttgatgaggttcctgactgttatgatgtgcagtaaagttatccatccc
agttctcttgtagttgtgttcgaaacattgttatcatcagctgcaacaacagttgatgag
gagaaaggcaatccatcctggcaatcacgagctgacttttacataacatgcattttatct
tgtctcccttggggaggagcggaactcattgagcaagtccctgaggaaattgagagagtt
atggtcggtgttgaagcttatttgagcataagaaaacattcttctgacactgggttgtcc
ttttttgaggatgatgatgagaatgcgagagaacctagcgataaggatttcttggaagat
ttgtggggccgaatacaagttttatctagcaatggatggaaacttgatagtgttcctaga
cctcacctatcatttgaagcacagctagttgcaggaaagtctcacgagtttggacccatc
agctgtcctgaccaacctgctatgccttcaacaatgtctaatataacttatggtaaacaa
aagcatgatgcagagtttatctatccacaaaggatacgaaggctgaatatatttcctgaa
agcaaaactgaggatgtgcaacccatggatcgcttcatcgtggaagagtatctgctagat
gtgctattttacttaaatggctgtcgaaaagaatgcgcttcatatatggctggcctacct
gtgccctttagatatgagtatcttatggcagagacaattttctcccagttgcttatgcta
ccacaaccccctttcaggccaatatattacacactagttattatcgacctctgtaaggct
cttcccggagcctttcctgcagtagttgctggtgctgtacgagctctttttgacaaaata
gctgatttagatatggaatgtcaaacacgactcatcctttggttttcacaccacttatca
aactttcagttcatctggccatgggaagagtgggctcatgtcttagaccttccaaaatgg
gccccacagcgtgtttttgttcaggaggtgctggagagagaagtccgtttatcttactgg
gataaagtgaagcagagtattgagcatgcccctggtctagaagagttgcttcctcccaag
ggagcaccgaatttcaaatttagcgttgaagaaaccagcgaaggaaatgagctaaatgca
ctttcttctgacctcagaaacatggtgaaagctagggcatctgcccgtgaaatgatagta
tggatagaggaaagtgtgtttcctgttcatgggatggaagttaccctcaatgtggttgtg
caaactctccttgacattggatctaaaagtttcactcatttgattactgtattggagaga
tatggccaagtcattgcaaaactatgtgctgaccaggataagcaggtcatgctgataaat
gaggttgattcttactggaggaataattctcaaatgactgctattgcaatagataggatg
atgggatatcgacttttgtctaatctggccattgtcagatgggtctttttacctgcaaac
attgagcaatttcatatatcagatcgtccatgggagatactaagaaatgcagttagtaag
acatataaccgtgtgtgtgatctaaggaaggagatttcatctatgaaaaagagtgtcgta
tcagccgaagaagctgcagcaacggtgaaagcagagttagaagcttctgaatcaaagctt
tcactcatggatggtgaacctgttatgggggaaaatcctgggaggctgaagcgtttgaag
tcacgtgctgaaaaggctaaggaggatgccgtgtctgtacgtgaatctttagaggctaag
gaggctcttctagcccgatcccttgatgaatttgaggcattattcttctccttgtacaaa
aacttcctcaatgcgttgactgaacggctgccagaagcatcgaaatgtgttacattgcag
ggattaaaggggattcatgcagattctatggccgttgaccatgaggaatcatccgcaatg
gatctcgacaatgagaatagaatacccaagaaaagtgaactgaatggtgggaagacgagt
aatgtttataatgtaggtgaaaaagagcagtggtgtctatcgactttaggctacctcaag
gccttctcgaggcaatatgcttctgagatttggcctcacatggagaagttggatgaagag
gttctaaccgaagacgtgcatcctcttattcgtaaatcagtttattgtggtcttcgtcga
gcaactgatgggtaa

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