Malus domestica (apple): 103448382
Help
Entry
103448382 CDS
T03194
Name
(RefSeq) uncharacterized protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
mdm
Malus domestica (apple)
Pathway
mdm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103448382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103448382
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103448382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
DUF2249
Motif
Other DBs
NCBI-GeneID:
103448382
NCBI-ProteinID:
XP_028944725
LinkDB
All DBs
Position
11:complement(join(29452853..29452963,29453215..29453284,29453384..29453574,29453718..29453813,29454413..29454519,29454673..29454715,29454877..29454966,29455241..29455312,29456696..29456848))
Genome browser
AA seq
310 aa
AA seq
DB search
MSAPFGGPIGSNPSAAGAQPNRDPNMASAEQLVLELSNPQLRENALLELSKKRELFQDLA
PLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNA
HIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEM
GSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGTMVASLADQPSSRLLKHII
RCYLRLSDNPRACDALRSCLPDMLRDATFSVSLREDPTTRRWLQQLLHNVGVSRVPALQG
GGGFDQMMMN
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaccgtttggaggcccgatcggttctaaccccagtgctgccggagcccagccg
aacagggacccgaacatggcgtcggcggagcagttggtgctcgaactcagcaacccccaa
cttcgtgaaaacgcgctccttgaactctccaagaagagagaattatttcaagatttggct
ccattgttgtggaattcttttggtactatagctgctctgttacaggagatagtttcaata
taccctgttctgtccccaccaaatttaactcctgcccaatcaaatcgagtttgcaatgct
ctagcgcttcttcagtgtgtggcatcacacccagacacaaggatgttgttccttaacgct
catatacctttatatttgtaccctttccttaatacaacaagcaagtcaaggcctttcgag
tacttgagactcactagcttaggagtcattggtgccttagtgaaggtcgacgatacagaa
gtgattagttttcttctatcaactgaaataatcccgttgtgcctgcgaactatggaaatg
ggtagtgaactgtcaaaaacagtggcgacatttattgttcaaaagattttgttggatgac
gtaggcttggattatatctgtactacagctgagcgttttttcgcagtgggtcgagtcttg
ggaaccatggttgcatcacttgctgaccagccttcatctcgcttgctaaaacatattatc
cgatgttatctacgattgtcagataacccaagggcttgtgatgctttgaggagctgtctt
cccgatatgttgagagatgctaccttcagtgtttccctccgtgaagatccaacgacaagg
agatggctgcagcagttgcttcacaacgttggtgttagtcgggttcctgcgcttcagggt
ggaggaggatttgatcagatgatgatgaactaa
DBGET
integrated database retrieval system
