Malus domestica (apple): 103448732
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Entry
103448732 CDS
T03194
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103448732
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103448732
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103448732
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf_RING_Vps8
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
zf-RING_Vps41
zinc_ribbon_16
zf-RING_16
PHD_NSD
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
103448732
NCBI-ProteinID:
XP_008386223
LinkDB
All DBs
Position
11:join(35352993..35353839,35354043..35354437,35354626..35354718,35354932..35355099,35355252..35355398)
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AA seq
549 aa
AA seq
DB search
MGQRNMLCPSQMIDLEMSQQGEGYPCPPPSVHFGGASSIQLHNVHTMVTASGGTTSFDAQ
HLPEGYDNAAFYGMAQYSGVQHHHNLDLGIATPANYYYSYMTPSSSTGVLPVPLNHGASD
PSPSSSHYGAIGISADEYGRNSRIMDDARGQFKRKNPEGLPGNFQYFNASATPSSSVPPL
NLRNPDGVAVMDAVTYALPQYAGTGNPPIMEAGPQSSMRNRSATAGLDSVMTHDHNHLNQ
VNYAGQRFQPAGTLWLDQHLSSNSGDGSSPSWNPVPTIPFMHGGNVTVGSMDSANMGMQR
YHDSSSNRNSSILRHPPPLNHRHHNQHVAPPMQGLRGHNLNFIPQGATAASYRLPTSSSR
STMNPSQNGLEIGRRQPGSIPSNGFRIYRPHQGVIPEAALRHQNLPHFRVLQADEGVIVD
VPNLYGSFLDQHRDMRLDIEDMSYEELLALGEQIGHVNTGLSDEAIRKQLKTRSYLSSSI
NLNLEDAGSPEKEADSCIICQDNYKNREKIGILHCGHEYHASCLKKWLLVKNVCPICKSE
ALNTGKKNV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggggcaaagaaatatgctatgccctagtcagatgatcgatttggaaatgagtcaacaa
ggggaaggttatccctgtcccccaccctccgtccattttgggggcgcttctagtatccaa
ctgcacaatgttcacacaatggtaacagcttcagggggcactactagttttgatgcccaa
catttacccgagggttatgataatgccgcattctatgggatggcccagtacagtggtgtt
cagcatcatcataatcttgatttgggcattgcgactccagccaactattattattcgtac
atgactccttcgtctagtactggggtgttacctgttcctctaaatcacggtgcttctgat
ccgtcgccatcttctagccattatggagccattggaatttctgcagatgagtatggtaga
aatagtcgcataatggatgatgctagaggtcagtttaagagaaaaaaccctgaaggccta
ccagggaatttccaatattttaatgcctctgcaacccctagttcttcagtgcctcctttg
aatttgaggaatcctgatggagttgctgtaatggatgctgtaacttatgccttgcctcag
tatgcgggaactggcaatccaccaattatggaagcaggacctcagagtagtatgaggaac
agatcagctacagctgggcttgattctgttatgacacatgaccataaccatctgaatcaa
gtaaattatgcgggtcagcgctttcagccggctggaacactttggttggatcaacattta
agtagtaacagtggggatggaagttctccatcctggaatccagttcctactattcctttt
atgcatgggggtaatgtcacagtaggttctatggacagcgcaaacatgggtatgcaaaga
tatcatgattcatctagcaacagaaattcctctattctccggcatcctcctccgctcaac
caccgccatcataatcagcatgtagcaccacccatgcaaggattaagaggccacaacctt
aattttatcccccagggtgccacagcagcttcatatagattacccacaagttcctcgcgc
agcaccatgaatccttctcagaatggtttggagattggtcgtaggcaaccaggatctatt
ccctcgaatggttttaggatatacaggccacaccaaggagttattcccgaggcagcttta
agacaccagaaccttccccacttcagagttcttcaggctgatgagggtgtcatagtagat
gttcctaatttatatggaagctttcttgaccagcacagagacatgcggttggacatagag
gacatgtcctatgaggagcttcttgcattgggggagcaaattggccatgtaaacactggg
ttgtcagatgaggccattagaaaacaactaaagacaaggtcttatttatcatcttcaatt
aatttaaacctcgaagatgctggatccccagagaaggaagccgattcctgcattatatgc
caggataattacaagaaccgcgagaagataggaattctccactgcggacacgagtatcat
gcaagttgcttgaagaagtggttgcttgtgaaaaatgtgtgccccatctgcaaatccgaa
gcgttgaacacagggaagaagaatgtatag
DBGET
integrated database retrieval system
