Malus domestica (apple): 103448823
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Entry
103448823 CDS
T03194
Name
(RefSeq) proteinaceous RNase P 1, chloroplastic/mitochondrial-like
KO
K18213
proteinaceous RNase P [EC:
3.1.26.5
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdm03016
]
103448823
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
103448823
Transfer RNA biogenesis [BR:
mdm03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
103448823
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRORP
PPR_long
TPR_24
PPR_2
PPR
PPR_3
RNase_Zc3h12a
PPR_1
MSC6_N
Motif
Other DBs
NCBI-GeneID:
103448823
NCBI-ProteinID:
XP_008386312
LinkDB
All DBs
Position
02:join(3556764..3558575,3558663..3558752,3558841..3559022,3559158..3559278,3559486..3559554,3559676..3559805,3559895..3560127)
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AA seq
878 aa
AA seq
DB search
MELFQRPHMASFTSNALQQKHHHHHLLSATLCKCPSAFHVFKFRFPSHIFTFSPPKQTLN
LYPLPLARQNISHIVAKLSSTTYHEPYTKSQNSGTGSGSEFSSLKSTEQRVSRKPVKNHV
GSGVEKKGEDTRKNLVFRKRREGNGPNGPNGPNGHSSRRFRDENAVKSSKSRGSLGVKEG
RNKRGGGNQVGGEERRGRGLKKYDADLPEVKMRVGLDMCSKRGDVMGAIRFYDLAQTEEI
KLEQYHYTVLLYLCSSAAVGVVRPAKSGSGSRTLDTLDSHSEETRVGSMDTSNLDNEDLD
DTCGSNSFDDDSDGTSDENENLAWFSNGFVKRNSRLLDGLNYPTKGGDDSSNVKEGSSKQ
EDNGIRVSEDVKKYALKRGFEIYEKMCSDNVPVNEAALTSVARMAMSMGDGDMAFDMVRQ
MKSMGINPRLRSYGPALSAFCHSGDIDKAFAVEKHMLEHGVYPEEPELEALLRVSVGVGK
GDKVYYMLHKLRTSVRRVSPSTADLIVKWFLSKEASRVGRTKWDRRSIRDAIENGGGGWH
GQGWLGKGKWSVLRTTIGDDGLCKCCGEKLATIDLDPVETENFAESVASIAIKREKNSSF
QKFQKWLDYYGPFEAVVDGANVGLFSQKKFVPSKVNAVVNGIRQKLPSKKWPLIVLHNRR
ITGGRMDERVNRALIEKWQNADALYATPTGSNDDWYWLYAAIKFKCLLVTNDEMRDHIFQ
LLGNDFFPRWKERHQVHFTFSDAGPVFHMPPPCSVVIQESEEGHWHIPVVSEHERESERT
WLCIMRAKSRTATKDSAAIPEDAQPPRHNGYARSATRTGVDSQPLNSGNKKYSKHKPKEF
IKNVKDILLGSVTSDHHSIVPDIATAEKIGGCTIDFQI
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggagctcttccaacggccacacatggcctccttcacctccaacgcactgcagcaaaag
caccaccaccaccacctcctctccgccaccctctgtaagtgcccgtcagctttccacgtc
tttaaattccgttttccttctcatattttcactttctcgccacccaaacagacccttaat
ctttatccacttccactagctagacaaaacattagccacatagttgcaaagttatcctcg
acaacgtaccacgaaccgtacacaaaatcgcagaactcaggaactggaagtggttcggag
ttttcttccttaaagtccacggaacaacgggtttcgagaaaacccgtaaagaaccatgtc
ggttcaggagtggagaagaagggtgaagatactaggaaaaatcttgtctttagaaagagg
agggaggggaatggtcctaatgggccaaatgggccaaatgggcattcttctaggaggttt
agagatgagaatgcggtaaaatcttcgaaaagccgaggcagtttaggggtaaaggagggg
aggaacaagaggggtggtggtaatcaggtgggaggagaagagagaagggggagagggttg
aagaagtatgacgctgatttgccggaagttaagatgcgagtaggtttggatatgtgctcg
aagagaggggatgtgatgggtgcaattaggttctatgatttggctcaaacggaagagatt
aagttggagcagtaccattatactgtgctgttgtatctctgctcttctgcagctgttggt
gttgttcgtccggcgaagagtgggagtgggagtcggactttggataccttggattcgcac
agtgaagaaactagggtgggatccatggatacatcaaatttggacaatgaggacctggat
gatacctgtggaagtaacagttttgatgatgattcggatggtacttccgatgaaaatgag
aatttagcatggttttctaatgggtttgtgaagcgaaattcccgccttttagatggactg
aactaccccacaaagggtggagatgattcttctaatgtaaaagaagggagcagtaagcaa
gaagataatggaattcgggttagtgaagatgtgaagaagtatgcgctcaaaaggggattt
gagatctatgagaagatgtgttcggataatgttccggtgaatgaggcagcattgacatct
gtggctagaatggcaatgtcaatgggtgatggagacatggcatttgatatggtgaggcaa
atgaagtcaatgggaataaatcctagactccgttcctacggtcctgcattatctgctttt
tgccatagcggagatattgataaagcatttgctgttgagaaacacatgttggagcatggt
gtttatccggaagagcctgaacttgaagccctcttaagagtgagtgtgggagttggtaaa
ggcgacaaggtgtattatatgctgcacaaactaagaacaagcgtaaggagggtgtcgccg
tctactgcagatttaatcgtaaaatggtttcttagtaaggaagcttcaagagtggggaga
acaaaatgggatcgaaggtctataagggatgcaatcgagaatggaggtgggggctggcat
gggcagggctggttgggaaaagggaagtggtctgtgttacgtactacaatcggagatgat
ggcttgtgcaaatgctgtggggaaaaactggccacaattgaccttgatcccgtagaaaca
gaaaactttgccgagtcagttgcatcaatagctataaaaagagagaaaaactcaagcttt
cagaaatttcaaaaatggctggactattatggaccttttgaagcagtggtggatggagct
aatgtaggccttttcagtcagaagaaatttgtcccgtccaaggtcaatgctgttgttaat
ggaatacggcagaaacttccttcaaagaaatggccacttattgttcttcataataggcgc
atcaccggaggcagaatggatgagagagtaaatagggcactgattgagaagtggcaaaat
gccgatgctctatatgcaacacctactggttcaaatgatgattggtactggttgtatgca
gctataaagttcaagtgcttacttgtgacaaatgatgagatgagagaccatatatttcaa
cttctcggaaatgatttctttcccagatggaaagaaaggcatcaagtgcatttcactttt
tctgatgctggtccagtctttcacatgcctcctccctgttctgttgtaatacaggaatca
gaggaagggcactggcacattccagttgtatcagaacatgagcgcgaatcagaaagaaca
tggctatgcattatgcgagctaaatcacgcacagcaacaaaggattctgcagccatccct
gaagatgcacaaccccctcgtcataacggatatgcaaggtcagccacccgaactggtgtt
gattcacagccactgaatagtggcaacaaaaaatattctaaacacaaacctaaggaattt
atcaagaatgtcaaagatattctgttggggtccgtgacctcggatcatcactcgattgtg
ccagacattgcaactgcagagaagattggtggatgcaccattgatttccaaatataa
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