KEGG   Malus domestica (apple): 103449066
Entry
103449066         CDS       T03194                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 10
  KO
K03134  transcription initiation factor TFIID subunit 10
Organism
mdm  Malus domestica (apple)
Pathway
mdm03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103449066
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103449066
   03036 Chromosome and associated proteins [BR:mdm03036]
    103449066
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103449066
   Coactivators
    SAGA/TFTC/STAGA complex
     103449066
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     103449066
    STAGA complex
     103449066
    TFTC complex
     103449066
    SAGA complex
     103449066
    SLIK complex
     103449066
SSDB
Motif
Pfam: TAF10 RNA_pol_Rpc82 CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 103449066
NCBI-ProteinID: XP_008386562
LinkDB
Position
08:complement(join(3700456..3700536,3700849..3700899,3700987..3701044,3701254..3701316,3701707..3701771,3701855..3701968))
AA seq 143 aa
MNQNPTQNQNQQPSDGGKHDDDAALTDFLASLMDYAPTIPDELVEHYLAKSGFQCPDVRL
IRLVAVATQKFVSEVATDALQQCKARQASVVKDKRDKQQKDKRLILTMEDLSRALREHGV
NVKHQEYFADSPSTGMDPATREE
NT seq 432 nt   +upstreamnt  +downstreamnt
atgaaccagaacccaactcaaaaccagaaccagcaaccgagcgacggcggaaagcacgac
gatgacgccgccctcaccgacttcctcgcctccttgatggactacgcccccaccataccc
gacgagctcgtggagcattacttggccaagagcggcttccagtgccccgacgttcgatta
atcaggctggtagctgtcgccacgcaaaagtttgtttctgaggttgcaactgatgctctt
cagcaatgcaaagcgagacaggcttctgtagtcaaagacaaaagagacaaacaacaaaag
gataagcgtttaatattgacgatggaagacctgtcaagggcattgcgtgagcatggcgtc
aatgtgaagcaccaagagtattttgcggacagcccttcaactgggatggatcctgcaaca
agggaagagtaa

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