Malus domestica (apple): 103449108
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Entry
103449108 CDS
T03194
Name
(RefSeq) RNA-binding protein BRN1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103449108
Spliceosome [BR:
mdm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103449108
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
103449108
NCBI-ProteinID:
XP_008386611
LinkDB
All DBs
Position
11:complement(join(39634516..39634643,39634726..39634869,39634962..39635292,39635496..39635675,39636008..39636087,39636189..39636314,39636471..39636522,39637754..39637836,39638055..39638229))
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AA seq
432 aa
AA seq
DB search
MAEGGKKERNSHGEDSVKLFVGQVPKHMTEAQLLAMFKDFALVDEVNIIKDKATRASRGC
CFVICPSREEADKAVDACHNKTTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVE
VSDLFSQYGTVKDLQILRGSQQTSKGCAFLKYETKHQALAALEAINGKYKMEGSSVPLVV
KWADTEKERLARRAQKAHSQAANEPNGDSQHPSLFGALPMGYVPSYNGYGYQAPGTYGLM
PYRIPGLQNQQGFQNMMPPINQENALHRITPRNIAPRNFPMPPTSYVASAYHAVPGLRHP
MMYPGGIMSHQPLSSPGSVSPTVVNINPASPGTSKSPGGQVEGPAGANLFIYHIPQEFGD
QELANAFQPFGRVLSAKVFVDKATGVSKCFGFVSYDLPESAESAINMMNGYQLGGKKLKV
QLKRDNKQSKPY
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggagggaagaaggagaggaactcgcacggcgaggacagcgtgaagctgttc
gtcggccaagtgccgaagcacatgacggaggctcagctcctcgcaatgttcaaagacttc
gctctcgtcgacgaagtcaacatcatcaaggacaaggccacgcgcgcttccagagggtgt
tgctttgtgatatgcccgtcgagggaggaggcggataaagcggtcgatgcgtgtcataac
aagacgactttgcccggggcatctagtcctttgcaagtgaagtatgctgatggcgagttg
gaaagactagaacataagctctttattggtatgcttccgaagaatgtttccgaagttgaa
gtttctgatcttttctctcaatatgggacagtaaaggacctacaaatattaagaggttct
cagcaaacgagcaaaggctgtgcattcttaaagtatgagacaaaacaccaagctcttgct
gcccttgaagccatcaatggaaagtataaaatggagggttcaagtgttcctttagttgtc
aaatgggcagacacagaaaaggaaaggctagctcggcgagctcagaaagctcattcccag
gctgctaacgagccaaatggtgattcacaacatccttcattatttggagccttgcccatg
ggttatgttccctcgtataatggttacggttatcaggctcctgggacttatggactcatg
ccataccgcatacctggattgcagaatcaacaaggtttccaaaatatgatgccccccata
aaccaagaaaatgctttgcatagaatcacacctcgcaatattgcccctagaaattttcct
atgcctcctacaagttatgtggcctctgcttatcatgcagttccaggtcttcggcatccg
atgatgtatcctggaggaataatgagccaccagccattgagttcacctggttcagtgtca
cctacagttgtgaacattaatccagcatcgcctggcactagtaaaagccctgggggtcag
gttgaaggtccagctggtgctaatttgtttatctatcacatacctcaagaatttggagat
caagagcttgccaatgcttttcaaccatttggtagggttttgagtgccaaggtttttgtt
gataaagcaactggcgtcagcaaatgtttcggatttgtaagttacgatttaccagagtct
gctgaatctgctataaatatgatgaatggataccaattagggggtaagaaattgaaggtc
cagcttaagagagacaacaaacagagcaaaccatattga
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