Malus domestica (apple): 103449214
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Entry
103449214 CDS
T03194
Name
(RefSeq) ribosomal RNA small subunit methyltransferase-like
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdm03009
]
103449214
Enzymes [BR:
mdm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
103449214
Ribosome biogenesis [BR:
mdm03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
103449214
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_12
Methyltransf_11
PRMT5
MTS
Methyltransf_23
Methyltransf_31
Methyltransf_2
PCMT
DREV
PPS_PS
Methyltransf_4
Methyltransf_28
Motif
Other DBs
NCBI-GeneID:
103449214
NCBI-ProteinID:
XP_008386722
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All DBs
Position
11:join(40909287..40909595,40909960..40910688)
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AA seq
345 aa
AA seq
DB search
MAGGKAKKEKARPAGHTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIGP
GTGNLTKKLLEAGKRVIAVEIDARMVLELQRRFQGTPHSNRLQVIQGDVLKTELPYFDIC
VANIPYQISSPLTFKLLKHQPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSRV
SHLLKVGRNNFRPPPKVDSSVVRIEPRKPALLVNQKEWDGFLRICFNRKNKTLGSIFRQK
SVINLLEKNYKTLQALNPATAQEEDTNDVIEFMDEDMEMDDDGVDDGTEMEVEDGNAEGE
VSEFKKKVLDVLKKSGFEGERSSKLKLQQFLDLLSQFNKDGIHFS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaggcaaagcgaagaaagagaaggcgaggccagcggggcacacgccctaccaa
ggaggcatatcgttccacaagtccaagggacagcatatcctcaagaaccccttgctcgtc
gactccatcgtccagaagtctggcatcaaatccaccgatgtcatcctcgagatcggtccc
ggtactggtaatctcaccaagaagcttctagaagctggtaagagggtcatcgccgtcgag
attgacgcccgcatggtcctcgagctgcagcgccgcttccagggcacccctcactccaac
cgcttgcaggtgattcaaggagatgtgctgaagactgagcttccctattttgatatatgt
gtggcaaacatcccttatcaaatctcatctcccttgaccttcaagttattgaagcaccaa
ccggccttccgatgtgccattataatgtttcagagggaatttgcaatgagactggttgcc
caacccggtgacaaactctactgtcgtcttactgtcaacacccaactattgtcacgggtc
tcccacctcctcaaagttggaaggaacaattttcgccctccgcctaaggtggattcttct
gtggtgcgaattgagcccaggaaaccggctttactagtgaaccaaaaggagtgggatggg
tttttgcggatctgtttcaataggaagaacaaaacccttggctcaatttttaggcagaaa
agtgtcatcaatttgctcgagaagaattacaagaccttgcaggcgcttaatcctgcgaca
gcccaggaagaggatactaacgatgtaatcgagtttatggatgaggacatggagatggat
gatgatggagtcgatgatggaacggagatggaggtggaggatggtaatgcggaaggggag
gtatccgaattcaagaaaaaggttctggatgtgttgaagaagtctggttttgaaggcgaa
aggtcctccaagctcaaattacagcaatttttagacctactttctcagttcaacaaggat
ggtatacacttctcctga
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