KEGG   Malus domestica (apple): 103449278
Entry
103449278         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K11797  PH-interacting protein
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103449278
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     103449278
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_2nd WDR55 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Bromodomain WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_EIPR1 VPS8_N WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 103449278
NCBI-ProteinID: XP_008386783
LinkDB
Position
11:join(40898453..40898808,40899347..40899501,40900057..40900296,40900746..40900855,40900951..40901028,40901107..40901213,40901294..40901388,40901459..40901589,40901719..40901822,40902540..40902617,40902742..40902820,40902949..40903117,40903383..40903453,40903648..40903728,40903832..40903902,40904205..40904301,40904406..40904465,40904610..40904664,40904757..40905151,40905242..40906933,40907037..40907606,40907753..40907811,40908021..40908213)
AA seq 1681 aa
MDPRKCTLSGGVTSLAMAPSSILNKLNEKAQFEKEERDTGHAIEAGVDIDIREVYFLIMH
FLSLGPCQRTFEQFGNDLLEHQLLPRRYHAWFSRSGIGSDNSNEDATSFPLSYSNLVERY
PHIERDHLVKLLKKLLLSIATPLHGKVGRSALNAADVPTLLGTGSFSLLDGDRNKENKRV
KPLPAHLRWPYMQADQVHGLNLREIGGGFTKHHRAPSIRSACYAIAKPSTMVQKMNNKKK
LRGHRNAVYCAIFDRSGRYVITGADDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNA
LVASASNDFSIRVWRLPDGFPISVLQGHTGAVTAIAFSPRLSAVYQLLSSSDDGTCRIWD
ARSSQCPLRVYMPKPSETSTGKSNAFAITGSSSSNGPQSHQILCCAYNANGTVFVTGSSD
TFARVWNALKSNTDNSEQPIHEMDVLAGHENDVNYVQFSGCVIPSKSSFSDSVKEETNGK
FKNSWFCHNNIVTCSRDGSAIIWVPRSHKIHGKVGRWTRAYHLKVPPPPLPPQPPRGGPR
QRFLPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTASSYVLDVHPF
NPRIAMSAGYDGQTIVWDIWEGVPIKIYELGHIKLVDGKFSADGTSIVLSDDVGQVYLIN
TGEGESQKDAEYDQFFLGDYRPLARDEFGYLIDQETQLSTYRRNLQDPLCDSSMIPYPEP
YQSTYQQRRLGALGMEWRPSSMKFSVGVDINTGQDYMMPPLPDLERMIEPLPDFIDAMLW
EPENEVVSEDTDSEYNVTDENSSEGEKGNISTSSSSDPDCSEEDGEAGCSHKDSLRRSRR
KRPKIESFERRVKKRRVGEHDRVISGINRTKITKGGRKVSKLKSSKAKTLRPQRVAARNA
RTVFSQNPGTSTEGEADDWEDDSSNSESLQQEFHTQSSDGDFQIMQRKHTKEEPSLHEFG
NISQPLVVSSSQSNVRRMPKLVFKIKKQEVPKDVKLKDNNQADFVSPSSRCQDATPDNQI
INSPVDPDSSSANLVDLNFSRNLLDNDLTDTGQTEKNGNSLEASASYQDSRVRLGEVKVR
TPKHTRSVDPIPIDVATGSLANFNAHIEEMNNVHRYVNPESDCEQFCNHSKKGKENYGVV
LPCRVEERTGTRAFEDLDGLRSRELSHTDEALVSSSFDSSALGEHKQKGIEGSLEIQELG
RRKHSGESRNNASLKFPAENLTSSRDLIPDDSSSMDPNSDLGVLKVGEGAGRSTSLKFVC
KHRINSEGSGGKVEEYATNINDHHDSGMDLPAAATNAIRGTRTLKIKETSWKVDSMSHSP
KLRWGHQTVGTSKDAEDSSAKLCEEIHQRPRSTRGRQGGSCTDYGQSSSTRSMLVNPAGK
LPWLMLSKHEDGYRYIPQLGDEVVYLRQGHQEYLKLVNNSEEGPWESIKENIKVAEVCKV
ESLEYASLPGSGESCCKIKLKFVDPSSAIFGKALKLTLPEIDFNDFIVEKTWYDASIRRN
WTTREECAVWWRDSISDGGGTWWVGQIIRCQPKSHEFPDSPWLRYEVRYENDDETHLHCP
WELREPSIVDDPSSCEQPHIDSESKEKLLRNFYKLQQKDFQTIQQLNQAVQKADFCNSFP
VQLYPELIQSRLENDYYRSLEAVKHDITVMLTNAQYYFKRNELQARIRHISKRFKKKLSK
L
NT seq 5046 nt   +upstreamnt  +downstreamnt
atggatcctcggaagtgtactttgtctggtggtgttacttctcttgccatggcaccttca
agcattttaaataagttgaatgagaaggctcagtttgaaaaagaagagagggatacaggt
catgctatcgaggctggagtagatatagacattagagaggtttattttttgattatgcac
tttctgtcacttgggccatgtcagaggactttcgaacagtttgggaatgatcttctggaa
catcagcttctacctagaaggtatcatgcttggttttcaaggagcggaataggaagtgac
aatagtaatgaggatgctacctctttcccattgagttacagcaacttggttgaaaggtat
cctcatatagagagagatcacttggtaaagcttctaaagaaactgctactgagtatagcc
actccattgcatggcaaggttggaagaagtgctctgaatgcagctgatgtccctacatta
ctgggaactggttccttctcgcttctggatggtgataggaataaggaaaataagagagtt
aagcccctgccagctcacctgcgttggccttacatgcaggctgatcaagttcatgggctt
aatttaagggaaattggaggaggtttcacaaagcatcatcgagctccatccattcgctct
gcgtgttatgcgattgctaaaccatcaactatggtgcagaagatgaacaacaaaaagaag
ctacgggggcaccgtaatgctgtttactgtgccattttcgatcggtctgggagatatgtt
atcacgggtgcagatgatcggcttgtgaagatttggtcaatggaaactgcactttgcttg
gctagctgtcgtggacatgaaggagacattactgacttggctgtaagttcgaacaatgct
ttggtggcatctgcttcaaatgacttttccattcgagtttggcgtttgccagatggattt
ccaatttcagttcttcaggggcatactggagctgtgactgctattgcatttagtcccagg
cttagtgctgtttaccagcttttatcgtcatcagatgatgggacttgtcgaatatgggat
gctaggtcctcccagtgcccactgcgagtatacatgccaaaaccttcagagacttcaact
gggaagagcaatgcttttgcaatcactggatcctcctcgagcaatggtccacagagccat
caaatactttgttgtgcttacaacgccaatggaactgtttttgtcacgggtagctctgac
acttttgcaagggtctggaatgctttaaaatctaatactgataactcagaacaaccaata
catgagatggatgtactggctggccatgagaatgacgtaaattatgttcagttcagtggt
tgtgtcattccttcaaagtcttcattttctgactctgtcaaggaggagactaatgggaag
ttcaaaaattcctggttttgtcacaacaacatagttacctgctctcgtgatggcagtgcc
attatatgggttccaagatcacacaaaatccatgggaaagttggacgttggacacgtgca
tatcatctaaaagttccacctcccccacttcctcctcagcctcctcgaggaggtccacgt
cagagatttcttcccacccctcgtggtgttaacatgattgtgtggagcctggataaccgc
tttgtgcttgcagctatcatggattgcagaatttgtgtttggaatgctgttgatggtagc
ttagtacattctttaaccggtcacactgcatcgtcttatgttttggatgtgcatcccttc
aatcctcgaattgctatgagtgctgggtatgatgggcaaacaatagtttgggatatatgg
gagggcgtgcctattaagatatacgaacttggacatataaaattggttgatgggaagttt
tcggcggatggtacatcaatagtactttcagatgacgttggccaagtatatttaataaat
acaggagaaggcgagtctcaaaaagatgctgaatatgatcagttcttccttggggattat
cgcccccttgcacgggatgagtttggatacctgattgatcaggagacacaactttccact
taccgaaggaatcttcaagatcctctatgtgattcaagtatgataccatacccagaacct
tatcagagtacataccagcaacgacgacttggtgctctgggcatggaatggcgtccatca
tccatgaaattttctgttggtgtggacatcaatactggccaggattatatgatgcctcct
ttgccagatctggaaagaatgattgaaccactaccagattttattgatgccatgttgtgg
gaaccagaaaatgaggttgtgagtgaagatactgattcggagtataatgttactgatgaa
aattctagtgaaggggagaaaggaaatattagcaccagttcttctagtgatccagactgc
agcgaagaagacggtgaagctggatgcagtcataaggacagccttcgtcgatcaaggaga
aaaagaccaaagattgagtctttcgagaggcgtgtcaagaaaaggagagtgggtgagcat
gatcgcgttatatctgggattaacagaactaaaatcacaaaaggtggccggaaagtttcg
aagttgaagtcttctaaagcaaagacattgagaccccagcgagtggcagcacgcaatgct
cgaactgtgttttctcagaaccctgggacatccacagaaggagaagcagatgactgggaa
gatgattcatcaaatagtgagtcacttcagcaagaattccacactcaaagcagtgatggg
gatttccagataatgcaacgaaaacatactaaagaagaaccatctctacatgagtttggc
aatatatcccaacctcttgtagtttcttcgtctcagtcaaacgtcagaaggatgccgaaa
ttggtttttaagattaagaagcaagaggttccaaaggatgtaaaactcaaagacaacaat
caggctgattttgtgtctccatcttctagatgtcaagatgccactccagataaccagatt
attaacagccctgtggatccagattcctcttcggccaatttggttgacctgaacttttca
agaaatctcttagacaacgatttgacagatactgggcaaactgaaaagaatgggaattct
ttggaagcatccgcaagttaccaggatagcagagtcagattgggcgaggtcaaggtgcgc
acaccaaagcatacaagatcagtagaccccataccaatcgatgtagccactgggtcgctt
gctaattttaatgcacatatagaagagatgaataatgtccatcggtatgttaatcccgag
agtgattgtgaacagttttgtaatcattcaaaaaagggaaaagaaaattatggagttgtc
ttgccttgcagggttgaggaacgtaccggaacacgtgcatttgaggatctggatggtctc
agaagtagagagctttctcataccgacgaggcccttgtatcttcatcatttgattcctca
gctttgggcgagcacaaacaaaaaggaattgagggctctctggagatacaggagcttggt
agaagaaagcactctggtgaatcaaggaataatgcttctcttaaatttcccgcagaaaac
ttaacaagttctagagatttaatccccgacgattcttcgagcatggatccaaattcagat
ttgggggtactgaaagtgggtgaaggtgctggcagatcaacttctttgaagtttgtttgc
aagcacaggattaattcggaaggttctggtggtaaggtggaagaatatgcaacaaatatc
aacgaccatcatgattcaggaatggatctccctgcagctgcaaccaatgcaatacgtgga
acaagaaccttaaagatcaaagaaacttcatggaaggtggactctatgagccatagccct
aagttgaggtggggccatcaaacagtggggacatcaaaagatgcagaagactcctctgcc
aaattgtgcgaggagattcatcaaagaccaaggtctacgagaggtcgtcaggggggttca
tgtactgattatggccaaagttcctcaacccgaagcatgttagttaaccctgctggcaag
ttaccatggctgatgttgtcgaaacatgaggatggttaccgttacattcctcagctcggt
gatgaagttgtatacctgagacagggccatcaagagtatctaaaactagtcaataattca
gaagagggtccttgggaatcaattaaggaaaacatcaaagttgcggaggtttgcaaggtt
gaaagcctcgaatatgcttcgctgcctggttctggggagagttgctgtaaaatcaaactt
aaatttgtagacccttcttctgctatctttggaaaagcgttgaagttgactttgcctgaa
attgattttaatgatttcattgttgagaaaacgtggtatgatgcttctattagaagaaac
tggaccactagggaggaatgcgcggtttggtggagggattcaatttcagatggaggtggg
acttggtgggtaggtcaaattattcgttgtcagcccaagtcacatgagtttcccgacagc
ccttggttaagatatgaggttcggtacgagaatgatgatgaaacccatttgcattgtcct
tgggaattgcgagaaccgtccatagtagatgatccatcctcatgcgaacagccccatatt
gattctgaaagcaaagagaagctgctgcgtaatttttataaattacaacagaaggacttc
caaacaatccaacaattgaatcaagctgttcagaaggcggatttctgcaacagctttcca
gtgcaattgtaccctgaactaatccagtcgaggttagagaacgactattatagaagcttg
gaagctgtgaagcatgatataacggttatgctgacaaatgcccagtattacttcaagaga
aatgaattgcaagcgcggattaggcacatctcaaagaggtttaagaagaaactgtcaaag
ttgtag

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