KEGG   Malus domestica (apple): 103449304
Entry
103449304         CDS       T03194                                 
Name
(RefSeq) TATA-box-binding protein 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
mdm  Malus domestica (apple)
Pathway
mdm03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103449304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mdm03000]
    103449304
   03021 Transcription machinery [BR:mdm03021]
    103449304
Transcription factors [BR:mdm03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    103449304
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103449304
  RNA polymerase III system
    TFIIIB
     103449304
  RNA polymerase I system
    SL1/TIF-1B
     103449304
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 103449304
NCBI-ProteinID: XP_008386815
LinkDB
Position
12:complement(join(466873,466977..467050,467150..467251,467977..468069,468169..468213,468607..468657,469659..469730,470121..470208,470956..471035))
AA seq 201 aa
MGDQSGLEESQPVDLSIHPSGIVPTLQNIVSTVNLDCKLDLKQIALQARNAEYNPKRFAA
VIMRIREPKTTALIFASGKMVCTGAKSEHQSKLAARKYARIIQKLGFNAKFKDFKIQNIV
GSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRD
DTYKAFENIYPVLTEFRKVQQ
NT seq 606 nt   +upstreamnt  +downstreamnt
atgggggatcaaagtggattagaagagagccaacctgtagatctttccattcacccctct
ggcatcgttcccactctccagaatatcgtatctacagttaacttggattgtaaattggat
cttaagcaaattgcgttgcaagctcgaaatgcagaatacaaccccaagcgttttgctgct
gtaattatgagaataagggagccaaaaactacagctttgatttttgcctctgggaagatg
gtatgcacaggtgcaaaaagtgaacatcaatcaaaactggcagcgaggaagtatgctcga
atcattcaaaagcttgggtttaatgctaaatttaaggatttcaagattcaaaatattgtt
ggctcctgtgatgttaaatttccgataagacttgagggtcttgcatactcccacggtgcc
ttttcaagttatgagccagagcttttcccggggctgatatatcgaatgaagcagccgaag
attgttcttcttatatttgtgtcggggaaaattgttattacgggtgcaaaggtgagggat
gacacatacaaggcctttgaaaacatataccctgtccttacagagttcaggaaggtccag
caatga

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