KEGG   Malus domestica (apple): 103449387
Entry
103449387         CDS       T03194                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
mdm  Malus domestica (apple)
Pathway
mdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103449387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdm03041]
    103449387
Spliceosome [BR:mdm03041]
 Complex A
  U2 snRNP components
   U2 related factors
    103449387
 Complex B
    103449387
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 103449387
NCBI-ProteinID: XP_008386928
LinkDB
Position
12:join(1717159..1717398,1717498..1717584,1717679..1717760,1719140..1719266,1719352..1719793)
AA seq 325 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQHPDMLTN
PGVDPQGQAIDPRKIQDNFEDFYEDLFEELSKYGQIESLNICDNLADHMVGNVYVQFREE
EHAQAALQNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE
LRRRLFGRNKRRHSRSRSRSRSPQRHHRGGYQERPHGGRGFGRRGEDERDHRFNDKSRRP
RSRSPGRRGRSRSPVGSGRRRSPPARESSAERRAKIEQWNKEREKVDSGNKYDDNNNSNN
HDDQWDGSAENNDQYFDDPQQHQHR
NT seq 978 nt   +upstreamnt  +downstreamnt
atggcggagcacttagcatccatcttcggcaccgagaaggaccgcgtcaactgccccttc
tacttcaagatcggagcttgccggcacggcgaccgctgctcccgcctccacaccaagccc
agcatcagccccaccctcctcctctccaacatgtaccagcaccctgatatgctcaccaac
cccggcgtcgacccccagggccaagccattgatccccgcaagatccaggacaacttcgag
gatttttatgaggatctgtttgaggagctgagtaagtacggacaaatcgagagcttgaat
atctgtgacaatttggctgatcacatggttggtaatgtgtacgttcagttcagggaggaa
gaacatgctcaagctgcgcttcagaatctcactgggaggttctatgcagggcgtcccatc
atcgttgacttttccccggtgacggattttcgtgaagctacctgtaggcagtatgaggaa
aatgtatgcaatcgaggtggctactgcaacttcatgcacttgaagaaaattagcagggag
ttgaggaggcggttatttgggagaaacaagcgaaggcatagtcgcagtcgaagcagaagc
cgcagtcctcaaaggcatcatcgtggtggttatcaggagcgcccacatggaggtcgtggt
ttcggtagaagaggagaagatgagagagatcatcgtttcaatgataaaagcaggaggcct
agaagccgcagtcctgggcgtagaggaagaagtagaagccctgtgggctctgggcgaagg
aggagtcctccagccagagaaagtagtgccgaaagaagggctaagatcgaacaatggaac
aaggagagggaaaaggtggattctggaaataagtatgatgacaataataacagcaacaat
catgatgatcaatgggatggttctgcagagaacaatgatcagtacttcgacgaccctcag
cagcaccaacacaggtag

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