KEGG   Malus domestica (apple): 103449491
Entry
103449491         CDS       T03194                                 
Name
(RefSeq) WD repeat-containing protein LWD1-like
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
mdm  Malus domestica (apple)
Pathway
mdm03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    103449491
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103449491
   03036 Chromosome and associated proteins [BR:mdm03036]
    103449491
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     103449491
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     103449491
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_RIG_2nd WD40 WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR3_2nd MIOS_WD40 Beta-prop_WDR41 NBCH_WD40 eIF2A Beta-prop_DCAF12 Herpes_UL37_2
Other DBs
NCBI-GeneID: 103449491
NCBI-ProteinID: XP_028946535
LinkDB
Position
12:complement(join(3452074..3452488,3452744..3453339))
AA seq 336 aa
MQRPAEKKAGVHTYISQWPIYSLAWSVRHDKPSRLAIGSFIEDYGNKVELVQFNQDTSDF
ATDNRLTFDHPYAPTNLMFFPSEDTTNPDLIATSGDYLRLWEIHDDRIELKSLLNSNRSS
EFNSAITSFDWVECDTRRVATSSVDTTCTIWDIEREAVDTQLVAHDKEVYDISWGGFNVF
ASASGDGTVRVFDLRNKERSTIVYENPTQDRSLLRVEWNKHDPRFIATVGMDSNKVVIVD
IRFPTSPLMELKKHGASVNAISWSPGKGHQICSVSDDSRAMIWDVVRPGFQSDSGGDMEP
EMWYGTTAQINQVRWSAVELNGIGIGFLNKFQLLKV
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgcaaagaccagcagagaaaaaagcaggcgtccacacctacataagccaatggccaatc
tactccttagcatggtcagtccgccatgacaagccttcacgcctagccataggcagcttc
attgaggactacggcaacaaggttgaattagtccagttcaaccaagacacatccgatttc
gccaccgataaccgcctcactttcgaccacccttacgcaccaaccaacctcatgttcttc
ccctccgaggacaccacgaatcctgatctaatcgccacgtccggcgactacttaaggttg
tgggagatccatgatgataggattgagctcaagtctttgctgaatagcaacaggagtagt
gagtttaattcggctataacatcttttgattgggtagagtgtgacactaggcgtgtggct
acttctagtgtggacactacctgcacaatttgggacattgagagggaagctgtggatact
caactggtggctcatgataaagaagtgtatgacatttcttggggtggcttcaatgtgttt
gcttcagcttctggtgatggcactgtcagggtgtttgatttgagaaacaaagagaggtct
accatagtttatgaaaaccctactcaagacagatctttgttgagggtagaatggaacaag
catgacccaagattcattgccacagttggaatggacagcaacaaagtggtaatagtggac
atcagatttcccacatcacctctaatggagctcaaaaaacatggtgccagtgtgaatgca
atttcatggtctccagggaagggacaccagatttgttcagtaagtgatgattcaagggct
atgatttgggatgtggtgaggcctggatttcaatcggacagtggcggcgatatggagccg
gagatgtggtatggaacgacggctcagattaatcaagtgcgttggtctgctgtagagttg
aacgggatcggtattggctttttgaacaagttccagctcttgaaggtttaa

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