Malus domestica (apple): 103449544
Help
Entry
103449544 CDS
T03194
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103449544
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103449544
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
103449544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_16
SPC25
Prok-RING_4
PPP1R21_C
RING_XB3-XBAT31
zf-HC5HC2H
Prok-RING_1
DUF4870
zf-RING-like
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
103449544
NCBI-ProteinID:
XP_070670222
LinkDB
All DBs
Position
02:complement(4699226..4700524)
Genome browser
AA seq
432 aa
AA seq
DB search
MIRILGQSQNFKFPKFHSSLIGFLLLSFLVFHVEAQPTGIEYSTDEQLNFQPSVALVIGV
LAIFFLLTFVLLVYVKFCHRSAYVVGNNHLRSTGLVTASARFSGIDKTVIEALPFFKFSS
LKGSKEGLECAVCLSKFEDIEILRLLPKCKHAFHISCIDYWLEKHSSCPLCRHRVSSEDL
TSITYSNSMRWINQSERRQDSNIELFVQREEDHSGSSRFSVGSSFRKVENVIDDELLIQE
VADVTEEGQKVLHKHKHKIVVSDLEFKNRWSNVSSADLLFLNSEMLNTMSSDRFSFRDLN
DEQFSPTKATGNQEIVKIREEMEMKRLFEDKFSTMSEHSSALVPSASVSIETSAHASSSV
NQGEKRSMSEITGLSRFGNLGSKNRTRELSLLENNAKEERMRRLWLPIARRTVHWFANRE
KRSPQPQRPLDV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgattagaattttgggtcagtctcaaaatttcaaatttccaaagtttcattcaagtttg
attggttttttgcttctgagttttctggtgttccatgtagaagcacaacctacaggcata
gaatattctactgatgaacaactaaattttcaaccaagtgttgctttggtgattggagtt
ctagcaatcttctttttactgacttttgtcctccttgtatatgtgaaattctgccacaga
agcgcttatgtggtaggaaacaaccatctccggtcaacaggacttgtcaccgcaagcgct
cgattttccggtattgacaagacagtgattgaggcccttccctttttcaaattttcttca
ctgaaagggtcgaaagaaggcctcgaatgcgcagtctgcctgtcgaaattcgaagatatt
gaaatcctcaggctgcttcccaaatgcaaacatgcttttcacatcagctgcattgattac
tggcttgaaaagcactcaagctgtcctctctgcaggcacagggttagttctgaggactta
acttccattacctactcaaacagcatgaggtggattaatcaatcagagcgccgccaggac
tcgaacatagagctctttgttcagagagaggaggatcacagcggttcttcaagattcagt
gtaggaagcagctttcgaaaagttgaaaatgtgattgatgacgaactgttgatccaagaa
gttgctgatgtgacagaggaaggtcagaaagtcctgcacaagcacaagcacaaaattgtt
gtttcggatcttgagtttaagaacagatggagcaatgtgagttccgctgacctcctgttc
ttgaattctgagatgcttaacacgatgtcaagcgataggttctctttcagagatttaaat
gatgagcagttttcgcccacgaaagcaacaggaaatcaggagattgtgaagattagggag
gagatggagatgaagagattgtttgaggacaaatttagtacaatgagtgaacatagttca
gctttggttccttctgcttcagttagcatagagacgtcagctcatgcctcaagttctgtg
aatcaaggcgagaaaagatccatgtccgaaatcactggtctttcgagatttgggaatttg
ggttctaagaacaggactagagagctttctctgcttgaaaacaatgcaaaggaggaaaga
atgaggcggctttggttgccgattgccagaagaacagtccactggtttgccaacagagag
aaaaggtctccacagcctcaacggcctttagatgtataa
DBGET
integrated database retrieval system
