KEGG T03194: 103449638

Malus domestica (apple): 103449638

Entry

103449638         CDS       T03194

Name

(RefSeq) ubiquitin C-terminal hydrolase 12 isoform X1

K11838

ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12]

Organism

mdm Malus domestica (apple)

Pathway

mdm03083

Polycomb repressive complex

Brite

KEGG Orthology (KO) [BR:mdm00001]
09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    103449638
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mdm01002]
    103449638
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103449638
Enzymes [BR:mdm01000]
3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103449638
Peptidases and inhibitors [BR:mdm01002]
Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   103449638
Ubiquitin system [BR:mdm04121]
Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    103449638

SSDB

Motif

Pfam:

USP7_ICP0_bdg UCH USP7_C2 MATH_2 MATH UCH_1 GMP_PDE_delta ubiquitin

Other DBs

NCBI-GeneID:

103449638

NCBI-ProteinID:

XP_028946226

LinkDB

Position

12:complement(join(5303073..5303114,5303230..5303316,5303416..5303490,5303606..5303722,5303885..5303971,5304182..5304247,5304465..5304530,5304755..5304826,5304905..5305006,5305102..5305279,5305376..5305431,5305522..5305632,5305748..5305816,5305995..5306103,5306187..5306275,5306391..5306468,5306859..5306981,5307088..5307207,5307318..5307398,5307477..5307623,5307721..5307799,5308098..5308172,5308699..5308808,5309527..5309625,5309933..5310048,5310142..5310250,5310327..5310545,5310643..5310908,5311917..5312074,5312184..5312331,5312553..5312625,5312855..5312884))

AA seq 1118 aa
MTMMTPAPLDQQQQEDEEMLVPNSDLVEGPQPMEVAQVEPASTVDSQPVEDPPTMKFTWT
IENFTRLNIKKHYSDMFVVGGYKWRILIFPKGNNVDYLSMYLDVADSGTLPYGWSRYAHF
SLAVVNHIHTKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPSRGYLVNDTVVVEAEVA
VRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSG
SIPLALQSLFYKLQYNDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
VVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE
GDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD
RENGKYLSPESDKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
VKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRDSDKDKIICNVDEKDIAE
HLRIRLKKEQEEKEDKRKYKAQAHLYTIIKVARDEDLTEQIGRDIYFDLVDHDKVRNFRV
QKQMPFNLFKEEVAKEFGIPVQFQRFWIWAKRQNHTYRPNRPLTPQEETQSVGHLREVSN
KTHNAELKLFLEVEFGPDLRPIPPPDKTKEDILLFFKLYEPEKRELRFVGRFFVKSSSKP
AEILGKLNQLAGFTPDEEIELYEEIKFEPCIMCEHLDKKTSFRSSQIEDGDIICFQKSTP
LESEEECKYPDVPSFLEYVHNRQVVHFRSLEKPKEEDFSLELSKLHTYDDVVEKLARQIG
LEDPTKIRLTAHNCYSQQPKPQPIKFRGVEHLTDMLVHYNQSSDILYYEVLDIPLPELQG
LKNLKVAFHHATKDEVVIHNIRLPKQSTVGDVINVLKTKVELSHPNAELRLLEVFYHKIY
KIFPHSEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKDTAQNQMQVQNFGEP
FFLVIHEGETLAEVKERIQKKLQVPDEEFAKWKFAFLSLGRPEYLQDSDVVSSRFQRRDV
YGAWEQYLGLEHSDNAPKRAYAVNQNRHTYEKPVKIYN

NT seq 3357 nt +upstreamnt +downstreamnt
atgactatgatgactcctgcaccgttggatcagcagcagcaagaggacgaagagatgctt
gtgccgaactcggatttggtcgaaggtcctcagccaatggaagtagcccaagtggagcca
gctagtacagttgatagtcaaccagtggaggatcctccaacgatgaaattcacttggaca
attgagaactttactaggttgaacatcaagaagcactactctgacatgttcgtagtgggc
ggctataaatggcggatactaatatttcccaagggaaacaatgtggactacttgtcaatg
tatttggatgtggcagattccgggacattgccatatgggtggagtagatatgcacacttc
agcttggctgtagttaatcatatccataccaagtactcaataagaaaggacactcagcac
caattcaatgcaagagaaagtgactggggattcacttcattcatgcctcttggtgatctt
tatgatccgagtaggggatatctggtgaacgatacagttgtggttgaagctgaggttgct
gtccgtaaggttctagattactggtcatatgactcgaaaaaggaaactggttatgttggg
ctcaagaatcagggagcaacttgttatatgaattctcttctccagactttgtaccatata
ccgtacttcagaaaggccgtgtatcatatgccaacaactgagaatgacatgccttcagga
agcatccctttggcgctacaaagtttattctataagcttcaatacaatgacagcagtgtt
gcaaccaaagaattgaccaaatcctttggatgggatacatatgattcttttatgcaacat
gatgtgcaggaacttaatagagttctttgtgaaaagcttgaagataaaatgaagggaact
gttgtggagggtacaatacagcagttgtttgaaggacatcacatgaattacattgaatgc
atcaatgtggattacaaatctacaagaaaggaatcattttatgacctacagcttgatgtg
aaaggctgtcgggatgtttatgcttcttttgacaagtatgtggaagttgaacgtcttgag
ggtgacaataaataccatgccgaagaacatggtttgcaggatgctaagaagggtgttctg
tttattgacttccctcccgttcttcaacttcagctaaagcgatttgaatatgattttatg
cgggacactatggttaagataaatgatcgctatgaatttcctcttcaacttgaccttgat
agggagaatggaaaatatctatcacctgaatcagataagagtgttcgcaacctctacact
cttcatagtgtcttggtgcatagtggtggggtgcatggtggccattactatgctttcatc
agaccaaccctctcagaccagtggtacaaatttgatgatgaacgtgtgacaaaagaggat
gtgaagagggctttagaagagcagtacggtggtgaggaagagttgccacagaccaatcct
ggcttcaataatactcctttcaaatttacaaaatactcaaatgcatacatgcttgtgtat
atacgggacagtgataaggacaaaataatatgtaacgtggatgagaaagacatagccgaa
catctaaggataaggttgaagaaagaacaagaagagaaagaggacaaaaggaaatataag
gcacaagcacacctctacactattattaaggttgctcgagatgaggatctgacagaacaa
attggaagggatatttattttgacctagtggaccatgacaaagttcgtaatttccgtgtt
cagaaacaaatgccctttaatcttttcaaggaggaggttgcgaaagagtttggcatacca
gtgcagtttcagcgtttctggatttgggccaagagacaaaaccacacatatcgccccaac
cgaccattgacacctcaggaagaaacacaatcagttggacacttgagagaggtatcaaat
aaaacacacaatgcagagctaaagttgtttctggaagtagagtttgggccggatctacgt
cctattcctccgcctgacaaaaccaaggaagatatccttcttttctttaagctttatgag
cctgagaaacgagaactacgttttgttggtaggttttttgtgaagagttctagtaaacca
gcagagattttaggaaaattaaatcaactggctggttttacccctgatgaagaaattgag
ctttatgaggaaataaagtttgagccatgtatcatgtgcgaacatcttgacaagaagacc
tcatttcgatcgagtcagattgaagatggggatattatttgctttcagaagtctactcct
cttgaaagtgaagaagaatgtaaatatcctgatgttccttcatttttggaatacgtacac
aatcgccaggttgttcatttccgttctttggagaaacctaaggaggaggatttcagttta
gaattgtcaaagctacacacttacgatgatgtggtggagaaattggctcgccaaattggt
ttggaagatcccaccaaaatcagactcactgcacataactgctattctcagcaacctaag
ccccaaccaattaaatttcggggcgtagagcatttaactgatatgttagttcattacaat
caaagctctgatattttgtattatgaagtcttggacatccccctgccagaattgcaaggc
ctaaaaaatctaaaagttgcttttcatcatgctacaaaagatgaggtggtgattcacaat
attagattgcccaaacagagcactgtgggggatgtcattaatgtacttaaaacgaaggta
gagctgtctcatccaaatgcagaactccgactgcttgaggttttctatcacaagatttac
aagatcttcccacacagtgagaaaattgagaatataaatgaccagtactggactttgcgt
gcagaggagattccagaagaagagaaaaacttgggtccccatgatcgcttgattcatgtt
taccactttacaaaagacactgcacagaaccagatgcaagtacaaaattttggggaacct
ttcttcttggtcatccatgaaggtgaaactttagctgaagttaaagaacggatacaaaag
aaattgcaggtccccgatgaggagtttgccaagtggaagtttgctttcttgtcacttggt
cgtcctgagtacttgcaggattctgatgttgtgtccagccgttttcagagaagagatgtt
tatggtgcatgggagcagtaccttgggttggagcactctgataatgctcctaagagagcg
tatgcagtaaatcagaaccgtcacacgtacgagaagccagttaaaatatacaactaa

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