KEGG T03194: 103449641

Malus domestica (apple): 103449641

Entry

103449641         CDS       T03194

Name

(RefSeq) ubiquitin C-terminal hydrolase 13-like isoform X4

K11838

ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12]

Organism

mdm Malus domestica (apple)

Pathway

mdm03083

Polycomb repressive complex

Brite

KEGG Orthology (KO) [BR:mdm00001]
09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    103449641
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mdm01002]
    103449641
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103449641
Enzymes [BR:mdm01000]
3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103449641
Peptidases and inhibitors [BR:mdm01002]
Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   103449641
Ubiquitin system [BR:mdm04121]
Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    103449641

SSDB

Motif

Pfam:

USP7_ICP0_bdg USP7_C2 UCH MATH_2 MATH UCH_1

Other DBs

NCBI-GeneID:

103449641

NCBI-ProteinID:

XP_028946222

LinkDB

Position

12:complement(join(5358224..5358964,5359108..5359194,5359334..5359408,5359529..5359645,5359736..5359825,5360018..5360083,5360306..5360371,5360753..5360824,5360902..5361003,5361095..5361272,5361373..5361428,5361591..5361701,5361823..5361891,5361983..5362091,5362176..5362264,5362381..5362458,5369641..5369718,5369818..5369955,5370061..5370139,5370530..5370604,5370850..5370959,5371137..5371235,5371537..5371652,5371746..5371854,5371933..5372148,5372244..5372509,5372619..5372776,5372888..5373038,5373236..5373242))

AA seq 1235 aa
MEVAQVEPACTVDSQPVEDPPAMKFTWTIENFTRLNTKKHYYSDMFVVGGYKWRILIFPK
GNNVDYLSMYLDAADSRTLPYGWSRCAQFGLAVVNQIHPKYSIRKDTQHQFNAREGDWGY
TSFMLLGDLYDQSRGYLVNDTVVVEAEISVCKVLDYGSYDSKKETGYVGLKNQGANGYMN
SLLRTWYHIPYFRKCVHHMPTTEDDMPSGSIPLALQRLFYKLQYSESSVASKELTKSFGP
THDLFVKHDLPELNRVLIKKLEDKMKGTIVEGTIQQLFEGHYRNYIECFNVDYKSTWKES
FYDLQLDVKGCRDVYASFSKFLEVKRLEGDNKYHSEELGLQDAKKGVLFIDFPPVLQLQL
KRFEYDFMRDTTVKINDRYEFPLQLDLDRENGKYLSPESDKSVRNLYTLHSVLVHSGGVH
GGHYHAFIRPTLSDQWYKFGDKCVTKEDVKRALEEQYGGEEETNPDFNNTPFKLTRHSDA
YMLVYVRDSDKDKVICNVDEKDIAEHLRIRLKKEQEKEKKERFKEQAHHYTIIKVGQIEG
VSNKMHNAELKLFLEVEFGPILRPISLPNKTEEDILLFFKLYEPEKQELRFVGRLFVKSF
TKPVEILAKFNQLAGFSLDEEIEIYEEIRFKPSVMCQRLDKMTSFQSSQIEDGDIICFQK
STPLEIDEGCKYPDVPSFLDYVHNRRIVHFHSLEKPTVEDFCLELSKLHTYDDVVEKLAH
HIGLEDPTKIRLTAHNCYSQQPRAQPIKYRGVEHLTEMLTHYNQTSDILYYEVFEITLPE
LQDLKHLKVAFHHATKDEVEIHSIRLPKQSIVGDVINVLKTKVELSHPNAELRLLEVFDH
KIYKIFPNSEKIENINNQYWTLRAEEIPEEEKNLGLYRRLIHVFHFTVTVLNQMVDQVQN
FGEPFVLVIHEGETLAEVKIRIQKKLQVPDEEFSKWKFAFLSLGRPEYLRDSDIVSSRFQ
RRDVYGAWEQYLGLEHSDKAPKRAHAANQAAQVTLESMASNVGHETASREIEMQNDDLDG
PASPAVDRTLRRLSAAEDLLKSTSARGPSVETLAALDTVSRYARSSLDTLCTNGAYEEFK
AALKLVTEQGMIPSTITSMFKDLLSSLDGEMLKYVAAVKELTQAEDFRVEHEGIEVQMGL
AMQKCQERKYIVANYDAKVTELEAELVRVKAERAEAMANLETAVDEMEPLKQRFADSSLK
SENLIVRQATLTLQKCSSVGTWAVLQDALKKYFKF

NT seq 3708 nt +upstreamnt +downstreamnt
atggaagtagcccaagtggagccggcttgtacagttgatagtcagccagtggaggatcct
ccagcgatgaaattcacttggacaattgagaactttactaggttgaacaccaagaagcac
tactactctgacatgttcgttgttggcggctataaatggcggatactaatatttcccaag
ggaaacaatgtggactacttgtcaatgtatttggatgcggcagattccaggacattgcca
tatgggtggagtaggtgtgcgcagttcggcttggcagtagttaatcagatccatcccaag
tactcaataagaaaggacacacaacaccagttcaatgcaagagaaggtgactggggatac
acttcattcatgcttcttggtgatctttatgaccagagtaggggatatctggtgaacgat
acagttgtggttgaagctgagatttctgtctgtaaggttcttgattatgggtcatatgac
tcgaaaaaggaaactggttatgttgggctcaagaatcagggagcaaatggttatatgaat
tctctactccggacttggtaccatataccatacttcagaaagtgtgtgcatcatatgccg
acaactgaggatgacatgccttcaggaagcatccctttggcactacaacgtttattctat
aaacttcaatacagtgaaagcagtgttgcaagtaaagaattgaccaagtcttttggtccc
acacatgatttgtttgtgaaacatgacctgccggaacttaatagagttcttatcaaaaag
cttgaagataaaatgaagggaactattgtggagggtacaatacaacagttatttgaagga
cattacaggaattacattgaatgcttcaatgtggactacaaatctacatggaaagaatca
ttttatgacctccagcttgatgtgaaaggctgtcgggatgtttatgcttcttttagtaag
tttttggaagttaaacgtcttgagggtgacaacaaataccactccgaagaactaggtttg
caggatgctaagaagggtgtcctgtttatcgacttccctcccgttcttcaacttcagcta
aagcgatttgaatatgattttatgcgggacactacggttaagataaatgatcgctatgaa
tttcctcttcaacttgaccttgatagggagaatggaaaatatctatcacctgaatcagat
aagagtgttcgcaacctctacactcttcatagtgtcttggttcatagtggtggggttcat
ggtggacattaccatgctttcatcagaccaaccctttcagaccagtggtacaagtttggt
gataaatgtgtgacaaaagaggatgtgaagagggctttagaagagcaatatggtggtgag
gaagagaccaatcctgacttcaataatactcctttcaaattgacaagacactcagatgca
tacatgcttgtgtatgtacgggacagtgataaggacaaagtaatatgtaatgtggatgag
aaagacatagccgaacatctgaggataagattgaaaaaagaacaagagaaagagaaaaaa
gagagatttaaggaacaagcacaccactacactattattaaggttggacaaattgaaggg
gtatcaaataaaatgcacaatgcggagctaaagttgtttttggaagtagagtttggaccg
attctacgtcctatttctctgcctaacaaaaccgaggaagatatcctgcttttttttaag
ctttatgaacctgagaaacaagaactacgttttgttggcaggctttttgtgaagagtttt
actaagccagtggagattttagcaaagttcaatcaacttgctggtttttcccttgatgaa
gaaattgaaatttatgaggaaataaggtttaagccttctgtcatgtgccaacgccttgac
aagatgacctcatttcagtcgagccagattgaagatggggacattatatgctttcagaaa
tctactccgcttgaaattgacgaaggatgtaaataccctgatgttccttcatttttggac
tatgtgcacaatcgccggattgttcatttccattctttggagaaaccgacggtggaggat
ttttgtttagaattgtcaaagctacacacttatgatgatgtggtggaaaaattagctcac
cacattggtttggaggatcctaccaaaatcagactcactgcacataactgctattctcaa
caacctagggcccaacccatcaaatatcggggagtagagcatttaacagaaatgttaact
cattacaatcaaacctctgatattttgtactatgaagtctttgaaattaccctgccagaa
ttgcaagatctgaaacatctaaaagttgcttttcatcatgctacaaaagatgaggtggag
attcacagtattagattgcctaaacagagcattgttggggatgtgattaatgtacttaaa
acgaaggtagagttgtctcatccaaatgcagaactgcgactgcttgaggttttcgatcac
aagatctacaagatcttcccaaacagtgagaaaattgagaatattaataaccagtactgg
actttgcgtgcagaggagattccagaagaagagaaaaacttgggtctctatcgtcgcttg
attcatgttttccacttcacggttactgtattgaaccagatggtagatcaagtacaaaat
tttggggaacctttcgtattggttatccatgaaggggaaactttagctgaagttaaaata
aggatacaaaagaaattgcaagtcccggatgaggagttctcaaagtggaagtttgcattc
ttgtcacttggtcgtccagagtacctgcgggattctgacattgtttccagccgatttcag
agaagagatgtttatggtgcatgggagcagtaccttgggttggagcactctgataaagct
cctaagagggctcacgcagcaaatcaagctgcccaagtaaccttagagtccatggcgtct
aatgttggccatgagacagcaagcagagaaattgaaatgcaaaatgatgacctggatggc
cctgcttctccagcagttgatcgaactctgagaagactttctgctgcagaggatctattg
aagtccacttcagccagaggaccatcagtagagactttggctgcattagacactgtgagc
cgttatgcaaggagcagcctagacacactctgcacgaatggggcttatgaggagttcaaa
gcagccttgaaacttgtgactgaacaagggatgatcccttcaacgatcacttccatgttc
aaggatcttctttcgtctttggatggtgaaatgctgaagtacgtggccgcagtaaaagag
cttacccaagctgaagattttcgagtcgaacacgaagggatagaagttcaaatgggactg
gccatgcagaaatgccaagagaggaaatacattgtggccaattatgatgccaaggttaca
gaacttgaggctgaactggtccgagtaaaggcagaacgagctgaggcaatggcgaatcta
gaaactgctgtggatgaaatggaacctcttaagcagaggtttgcagatagctcattaaaa
tctgaaaacttgattgtgaggcaggctaccttgacattgcaaaagtgtagttctgttgga
acctgggccgtcctacaagatgcactgaagaagtactttaagttttag

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