Malus domestica (apple): 103449658
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Entry
103449658 CDS
T03194
Name
(RefSeq) F-box protein At3g58530-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103449658
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103449658
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
103449658
NCBI-ProteinID:
XP_008387209
LinkDB
All DBs
Position
12:join(5818462..5818638,5818777..5818836,5819202..5819285,5820071..5820201,5820292..5820367,5820668..5820738,5821083..5821169,5821251..5821323,5821415..5821482,5821582..5821650,5822080..5822185,5822270..5822335)
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AA seq
355 aa
AA seq
DB search
MEEKQVEEAGGEEVAWSRETLPKVLKIVSTRLPQRDLISLLLVSPWLNATLISYPSLWLL
LELREMNNAGNRLVDALSLARYQHVKQINLEFSQDIEDKYLELVKSKCHDSLQNLEVLNL
NGCQKISDKGIEAITSSCPNMKEFSIYWNVRATDIGIMHLVKNCKHVVDLNLSGCKNLSD
KSLQLVAENYPELQLLNLTRCVKLTDSGLQQILHSCPCLHSLNLYALSSFTDEAYKKISL
LSHLQFLDLCGAQNLSDEGVSCIARCKSLLSLNLTWCVRVTDLGVIAVAQGCTSLEFLSL
FGIVGVTDKCLEPLSLTCSNTLTTLDVNGCIGIKKRSRDELLQMFPKLRCFKVHS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaaacaagtagaagaagcaggtggggaggaggtggcttggagcagagaaacg
cttcccaaagttctgaaaatagttagcacaagactgcctcagagggacctcatctctctc
ttgctagtcagcccatggctcaacgcaactctcatctcctacccttccctttggctgctt
ctggaacttcgagaaatgaataatgctgggaatcgccttgtggatgctctttcattggcg
aggtatcagcatgtgaagcagataaaccttgaattttcacaagacattgaagacaagtat
cttgaactcgtaaagagtaagtgtcatgattctcttcaaaacctggaggttttgaatctt
aatggctgccagaagatctctgataagggaattgaagctataaccagttcttgccccaat
atgaaggagttttcaatctattggaatgtgagggcaacagatataggtataatgcacctg
gtgaaaaactgcaagcatgtagttgatctgaatttaagtggctgtaagaatctttcagac
aaaagcttgcaattagttgctgagaattatccagaattacagttgttgaacctgaccagg
tgtgtcaagttaacagattctggcttgcagcagatattgcacagttgtccttgtctccat
agtctaaatttgtatgccctgtcaagcttcactgatgaagcttacaagaaaatatcactt
ctttcccatcttcaattcttggatttatgcggtgctcagaatctatcggatgaaggggtg
tcttgtatagctagatgcaagagccttttgtctctcaatttgacatggtgtgtacgggtc
actgatttgggggtcatagccgttgcgcagggttgtacgtcgcttgaatttctcagctta
tttgggatagttggggtgactgataaatgcttggagcccctttcactgacctgctcaaac
acacttacgactcttgatgttaatggatgtattggaattaagaaacggagccgtgatgaa
ttgcttcaaatgtttccaaagttgcggtgcttcaaagtgcacagctaa
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