Malus domestica (apple): 103449667
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Entry
103449667 CDS
T03194
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103449667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103449667
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103449667
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
103449667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
Beta-prop_NOL10_N
FAIM1
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
103449667
NCBI-ProteinID:
XP_008387215
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All DBs
Position
12:complement(join(6107525..6107845,6108046..6108432,6109195..6109350))
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AA seq
287 aa
AA seq
DB search
MAITKSETGSNSMLSKTTPGLGGKHGLYSTNGVHELLECPVCTNLMYPPIHQCPNGHTVC
SDCKIRVHNCCPTCRYELGDIRCLALEKVAESLELPCRYQSLGCHDIFPYYSKLKHEQHC
RFRLYNCPYAGSECSITGDIPTLVAHLKEDHKVDMHDGCTFNHRYVKANPNEVENATWML
TVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDDIEAKKFSYSLEVGANGRKLIWQGIP
RSIRDSHRKVRDSQDGLIIQRNLALYFSGGDRQELKLRITGRIWKEE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcacaaagtcagagacaggtagtaatagtatgcttagtaagactacccctggt
ttgggtggaaagcatggtctttattcaaccaatggtgtgcatgagttgcttgagtgccct
gtctgcacgaatttgatgtaccctcctattcatcagtgtcctaatggccacacagtatgt
tcggactgcaagataagggtgcacaattgttgccccacttgccgctatgagcttggtgat
ataaggtgtttggctttggagaaagttgctgaatcattggaacttccatgcagataccag
agtttaggatgtcatgatatttttccttactacagcaaactcaaacatgaacaacactgt
cgatttcgtctatataattgcccttatgctggatctgagtgctctattacaggtgacatc
cccactctcgttgcacatcttaaagaggatcacaaggttgacatgcatgatgggtgcacc
ttcaaccatagatatgttaaagcgaacccaaatgaagttgaaaacgcaacttggatgctt
actgtcttcaattgtttcggaagacaattctgtttgcactttgaggctttccagttagga
atggctccagtctacatggcctttttacgattcatgggtgatgatattgaggctaagaaa
ttcagctatagtttggaagttggtgcaaatggccgtaagctaatatggcaagggatccct
aggagtatccgcgacagtcatagaaaagtccgtgacagccaggatggactcattattcag
aggaatctggctctctatttctcaggtggggataggcaagaactaaagttgaggattact
ggccgtatatggaaagaagaatga
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