KEGG   Malus domestica (apple): 103449746
Entry
103449746         CDS       T03194                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 12
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
mdm  Malus domestica (apple)
Pathway
mdm03020  RNA polymerase
mdm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103449746
  09124 Replication and repair
   03420 Nucleotide excision repair
    103449746
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103449746
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103449746
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     103449746
  RNA polymerase III system
   RNA polymerase III
     103449746
  RNA polymerase I system
   RNA polymerase I
     103449746
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103449746
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 Zn_Ribbon_YjdM At4g08330 Zn_ribbon_13 DUF7129 DUF5816 DZR HypA Fin Zn_ribbon_3 Zn_ribbon_LysW Zn_ribbon_8 Prok-RING_1 C1_1 SHLD2_C DUF1451 Cas12f1-like_TNB Zn_Ribbon_TF ZnF_RZ-type
Other DBs
NCBI-GeneID: 103449746
NCBI-ProteinID: XP_028948859
LinkDB
Position
14:join(8184710..8184752,8184853..8184945,8186228..8186250)
AA seq 52 aa
MDPPPPEAVYYICGDCGMEVQLKSNDVIQCRECGYRILYKKRTRRIVQYEAR
NT seq 159 nt   +upstreamnt  +downstreamnt
atggatccgccgccgccagaggccgtctactacatctgtggagattgtgggatggaggtt
cagttgaagtccaatgacgtgattcagtgccgcgagtgcggttaccgtatcttatacaag
aagcgtactcgccgcattgttcagtacgaggcgcgctga

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