| Entry |
|
|---|
| Name |
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
|
|---|
| KO |
|
|---|
| Organism |
mdm Malus domestica (apple)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:mdm00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103449968
03015 mRNA surveillance pathway
103449968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mdm03019]
103449968
Enzymes [BR:mdm01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103449968
Messenger RNA biogenesis [BR:mdm03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103449968
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
12:join(15372513..15372791,15372970..15373263,15373441..15373668,15374012..15374077,15374545..15374949,15375046..15375175,15375743..15375828,15376070..15376126)
|
|---|
| AA seq |
514 aa
MAESDAPAPATATAEPSAPSEKSSPEASTTAPPPAQKPETKRWADEEDDPPEEPEKKDDA
PAPSTSEPEVNLAELKITENKFLDDPEDSNISAVTDGDTPYTSASSFEDLKLSPEVLKGL
YVEMQFKKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPNLKAPQAL
CICPTRELAIQNMEVLQKMGKYTGITAECAVPTDRTSSTSTQSRPPVSAQIVIGTPGTIK
RLMSTKKLGVSKVKVLVFDEADHMLAEDGFKDDSLRIMKDIERFSSHCQVLLFSATFNEK
VTNFVSKVIKGGGNQLFVKKEELSLEAVKQYKVYCPDELAKIDVIKSKIFELGEKLGQRI
IFVRTKNSARMLHQQLVQDGYAVTTIQGALNAEDRDKIVKEFKDGLTQVLISTDLLARGF
DQQQVNCVVNYDLPIKYREGPRTRDPPEPDYEVYLHRIGRAGRFGRKGAVFNLICGDWDE
LTMSKIEQYFNTPVTEVQNTEEAFEGALKAAGLL |
|---|
| NT seq |
1545 nt +upstreamnt +downstreamnt
atggctgagagcgacgcccccgcccccgccacagcgaccgcagaaccgtcggcgccgtca
gaaaagtcgtctcccgaggcgtctaccaccgctcctccgccggcgcagaagcctgaaaca
aaacggtgggccgacgaagaggacgaccctccagaggagcccgagaagaaagacgacgcg
cctgcgccctctacttccgagccggaggtcaaccttgccgaattgaagattacggagaac
aagttcctcgacgaccccgaagactctaatatcagtgccgttactgacggagacacgccg
tacacatccgcgagtagtttcgaggatctgaaactgtcgccggaggtactgaagggtttg
tatgtagagatgcaattcaagaagccgagcaaaatccaggcgatcactttgccaatgatt
ttgacccctccctataaagatcttattgctcaggcgcataatggttcgggcaaaaccact
tgtttcgtgctcgggatgctcagccgtgtcgatcccaacctcaaagctcctcaggcgctc
tgcatttgccccaccagagagttggccattcagaatatggaagttcttcagaagatgggg
aagtacacagggataactgcagagtgtgctgtccctacagataggacgagttctacctcg
acgcaatccaggccaccagtgtcggcacaaattgtgattggaactcctggtacaattaag
agattaatgtcgacgaaaaaactcggtgtgagcaaggtcaaggttcttgttttcgacgag
gctgatcacatgcttgccgaggatggctttaaggatgattctttgaggataatgaaggac
atagagaggtttagctctcactgccaggtgcttttattttctgctacatttaatgaaaaa
gtcacaaactttgtttcaaaagtgatcaaaggtggtggtaatcaactctttgtaaagaaa
gaagagctatctttggaggctgtgaagcagtacaaggtgtactgccctgatgaattggca
aagatcgacgtcatcaaaagtaaaatatttgaactgggagagaaattggggcagagaatt
atatttgtacggacaaaaaatagcgcaagaatgttgcatcagcaacttgttcaagatggt
tatgcagttactactattcaaggtgccctcaatgctgaagatagagacaaaatagtcaaa
gagttcaaagatggcttaacccaagttcttatatcaactgacctactcgctcgaggcttt
gatcaacagcaggttaattgtgttgtcaattatgatcttccaatcaaatatagagagggc
cccaggacacgtgatcctcccgaacctgattatgaggtctacttgcatagaattggaagg
gcaggacgttttggtcgcaagggggctgtgtttaacttgatttgcggtgattgggatgaa
ttgaccatgtcaaagattgagcagtattttaacaccccagtaacagaggttcaaaacacc
gaagaagcttttgaaggcgctcttaaagctgccggtttactgtaa |
|---|
