Malus domestica (apple): 103450235
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Entry
103450235 CDS
T03194
Name
(RefSeq) RHOMBOID-like protein 1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mdm01002
]
103450235
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
103450235
Peptidases and inhibitors [BR:
mdm01002
]
Serine peptidases
Family S54: Rhomboid family
103450235
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
CcmH
DUF6480
Motif
Other DBs
NCBI-GeneID:
103450235
NCBI-ProteinID:
XP_008387771
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All DBs
Position
12:complement(join(21240553..21240675,21240976..21241102,21241988..21242253,21242350..21242513,21242770..21242933,21243616..21243947))
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AA seq
391 aa
AA seq
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MAGEPPSSGAQMRVNSRRHYNVVHPVDIETPPLASPAPAVSPPVYREIKHFKKWVVWLIP
VFVAANVVMFIITMYVNNCPKNSVSCIATFLGRFSFQPFKENPLLGPSSSTLQKMGALDV
NKVVDRHQGWLLITCNWLHGGVFHLLANMLSLLVIGYRLEQEFGFVRIGLLYVISGLGGS
LLSSLFIQTNISVGASGALFGLLGAMLSELITNWTIYASKFGALFTLLIIIAINLAVGTL
PHVDNFAHIGGFLSGFFLGFVFLIRPQFGWVNQRYTSPGPGYASSQTKSKFKTYQCVLWV
LSVIVLIVGFTVGLVMLLRGVDANKHCSWCHYLSCVPTSRWSCNSEPAYCTTNQMGDQIY
LTCSSNGKNGTYTVPNASSSQIQGLCSQLCS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggagccaccgtcgtcgggtgcccaaatgagagtgaactcacggcggcactac
aacgtagtccacccagtagacattgagacgccgccgctagcctccccagctccggctgtg
tctccgcccgtgtacagagagatcaagcatttcaagaaatgggttgtctggctgattcct
gtctttgttgctgccaacgtcgttatgttcatcatcaccatgtatgtcaacaactgcccc
aagaactcagtctcttgcattgccacgttcttggggaggttctccttccagccttttaag
gagaacccgcttcttggaccgtcctcatcgacgttgcagaagatgggggctttggatgta
aataaggtggttgacagacaccaggggtggcttctcatcacttgcaattggttacatggg
ggtgttttccatttattggctaatatgttgagccttttagtcatcggatatcggttagag
caagagttcggctttgtccggattgggttgctatatgtcatctctggacttggtgggagt
ttgttgtcttcacttttcatccaaacaaacatctctgttggtgcttctggtgcacttttc
gggttgctgggagccatgctttctgaacttatcactaattggacaatttatgctagtaag
tttggagcacttttcaccctcctgatcatcatagcaatcaatttggcagtgggaacactc
ccacacgttgacaactttgctcatattggaggattcctttcgggattttttcttgggttt
gtgtttcttatccgcccccagtttggatgggttaaccaaagatatacttctccaggtcca
ggatatgcctcatctcaaacaaaatcaaagttcaagacctatcagtgcgttttgtgggtc
ctctctgtgatcgttttaattgttgggtttacagttggcctcgttatgcttcttcgggga
gttgatgccaataagcattgttcttggtgtcattatttatcttgtgtccctacttcaaga
tggagctgcaactcggagcctgcatactgcacgacaaaccagatgggtgatcaaatctat
ttaacttgctcgagcaacggtaagaacggcacgtatacggttccaaatgcaagcagttct
cagatccaggggttatgctctcagctttgcagttga
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