Malus domestica (apple): 103450700
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Entry
103450700 CDS
T03194
Name
(RefSeq) pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103450700
Enzymes [BR:
mdm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103450700
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103450700
NCBI-ProteinID:
XP_008388293
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Position
06:complement(join(35333471..35333689,35333791..35333929,35334055..35334410,35336607..35337077))
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AA seq
394 aa
AA seq
DB search
MASHPGNLNANMRCLFLGLFIVIIVGFAPNPILAKKTKVDGMKLNVIDSCWRWNSNWRSN
RQELASCSVGFAGKMSNNAGSDVKYYQVTDPSDNALDPTPGTLRYGVTMIRGKKWITFRR
DMRIQLQKPLLISSFTAIDGRGATVHIAGNACLVVFKASDVIIHGLRIHHCRSQPASSVM
GPDGKIRQLGQVDGDAIRLVTASKVWIDHNTLYECQDGLLDVTRGSSLITISNNWFRDQD
KVMLLGHDDGYVRDRNMRITVLYNHFGPNCNQRMPRIRYGYAHVVNNLYREWSQYAIGGS
MNPSVKSEANLFIAPKSLNNKEITWRKDSIGNKNSWIFYSVRDIFENGASFVQSGTGGAK
PHYNREQTFRVVDAKSVRSLTRSSGALTCIKSRC
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcatcccggaaatcttaatgccaatatgcggtgcttgtttttgggccttttc
atcgtcattatcgtcggcttcgctccaaaccctattttggctaagaaaacaaaagttgat
ggaatgaaattgaacgtgattgacagttgctggagatggaactcgaattggagaagtaac
cggcaggaacttgcgtcatgttcagtgggatttgctgggaaaatgagcaacaacgcagga
agtgatgtcaaatactatcaagtcacagaccctagtgataatgcgttggaccccacacca
ggaactttgagatatggggttaccatgatcagagggaaaaagtggatcacctttcggagg
gacatgcggattcagctccagaaaccacttctcattagtagttttactgccattgatgga
agaggtgctactgttcacattgccggcaatgcgtgtttggtagtctttaaggcaagcgat
gtaatcatccatggactacgaatccaccattgtcgatcccaaccagcaagctcagttatg
ggtccagatggaaagataaggcaactagggcaggtcgacggagatgctatcaggttggta
actgcatcaaaggtttggatagaccacaatacactctacgagtgccaggatggccttctc
gatgttactcgaggatctagccttatcaccatctccaacaattggttcagagaccaggac
aaggttatgcttctcggccacgatgatggctacgttcgggacaggaacatgaggatcacc
gtactctataaccattttggacccaactgcaaccaaagaatgccaaggattcgctatgga
tatgcacacgtcgtgaacaatctctacagagaatggtcacagtacgccatcgggggaagt
atgaatcctagcgttaagagtgaagccaacctctttattgcaccaaaatcgttaaacaat
aaagagatcacttggaggaaggacagcattgggaacaagaactcatggatattttactct
gtacgagatatcttcgaaaatggggcttccttcgtccaatcaggtacaggtggagcaaag
cctcactataacagggaacaaactttccgagttgttgacgccaaatccgtccggtcattg
acaaggtcatcaggcgctttaacgtgcatcaaatccagatgctaa
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