Malus domestica (apple): 103450948
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Entry
103450948 CDS
T03194
Name
(RefSeq) serine--tRNA ligase-like
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103450948
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mdm01007
]
103450948
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdm03016
]
103450948
Enzymes [BR:
mdm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
103450948
Amino acid related enzymes [BR:
mdm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
103450948
Transfer RNA biogenesis [BR:
mdm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103450948
Prokaryotic type
103450948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
YabA
eIF3_N
DUF3450
Motif
Other DBs
NCBI-GeneID:
103450948
NCBI-ProteinID:
XP_008388578
UniProt:
A0A498IFE5
LinkDB
All DBs
Position
12:complement(join(28567208..28567417,28567701..28567880,28568351..28568534,28568617..28568720,28568979..28569172,28569329..28569434,28569518..28569679,28570389..28570459,28570591..28570723))
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AA seq
447 aa
AA seq
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MLDINLFREEKGHNPEIIRESQRRRFKGVEIVDEVIQLDKEWRQRQFELESLRKEFNKIN
KRVAQLRIAGEDATEVIKDTEENKRLAAEKEVEVREALTQLNSKLDIIGNLVHDSVPFSN
DEENNAVIRSWGDKRVEPKLKNHVELVELLGIADLKKGAEVAGGRGFYLKGVGVRLNQAL
INFGLDFLEKRGYTELHTPFFMRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATSEQPL
CAYHIDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITTPNGND
SWEMHEEMIKNSEEFYQALGLPYHIVSIVSGALNDAAAKKYDLEGWFPASQTYRELVSCS
NCTDYQSRKLEIRYGQKKSNEQTKQYVHLLNSTLTATERTMCCILENYQTEEGVNVPKVL
QPFMGGKEFLPFKEKPVPEVKGKKSKA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgctggacatcaatctgttcagagaggagaagggccacaaccccgaaataatccgggaa
tctcaacgacgacgtttcaaaggcgtcgagatcgtcgacgaggtcatccagctcgacaaa
gaatggcgacagcgtcaattcgagctcgagagccttcggaaagagttcaacaagatcaac
aagcgagttgctcagctgaggattgcaggagaggatgcaactgaggtgattaaagacaca
gaggaaaataaaaggttggcagcagagaaagaagttgaagtgcgagaagctttaacacag
ttgaattcaaaactggacatcattggaaaccttgtgcatgattcagttccctttagcaat
gatgaggaaaataatgctgtgattagatcatggggtgacaaacgagtggagccaaaactc
aaaaaccatgttgaacttgttgagcttcttgggatcgcagacttgaagaaaggcgctgaa
gtggcaggaggtagaggtttttacctgaaaggtgttggtgtacgccttaatcaagctctg
ataaactttggtcttgattttcttgagaaaaggggatatacagaactgcataccccattt
ttcatgagaaaagatatcatgggaaaatgtgctcaattagcacaatttgatgaggaactt
tacaaggttaccggtgaaggtgatgacaaatatctgattgctacatctgaacagccactt
tgtgcatatcatatagatgattggatccatccatcccagctacccttaagatatgcggga
tattcatcttgttttcgtaaagaagctggttcacacggtcgagataccttgggaattttt
agggttcatcagtttgagaaagttgaacagttctgtattacaaccccaaatggcaatgat
tcttgggaaatgcacgaggaaatgataaaaaactctgaggaattttatcaagcgttaggg
ctcccctatcatattgtgtccatcgtttctggtgctttgaatgatgccgcagcaaagaag
tatgatctggaaggatggtttcctgcatctcagacatatagagagctggtttcttgttca
aactgtacggactaccagtcaagaaagttagaaattcgatatgggcagaaaaagagcaac
gagcagacaaagcaatatgttcacttattgaactcaactcttactgcgacagagagaacc
atgtgctgcattctcgagaactaccagaccgaagagggtgtaaatgtaccaaaagttctt
caacctttcatgggtggaaaggagttcctaccgttcaaggagaaaccggtccctgaagtc
aaagggaagaaatcgaaggcctaa
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