KEGG   Malus domestica (apple): 103450993
Entry
103450993         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein
  KO
K15361  WD repeat-containing protein 48
Organism
mdm  Malus domestica (apple)
Pathway
mdm03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    103450993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103450993
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     103450993
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_IP5PC_F Beta-prop_DCAF12 WD40_RFWD3 RAWUL Beta-prop_WDR75_2nd Beta-prop_DCAF4 ANAPC4_WD40
Other DBs
NCBI-GeneID: 103450993
NCBI-ProteinID: XP_008388634
LinkDB
Position
12:complement(join(29715432..29715530,29715780..29715971,29716088..29716181,29716428..29716789,29717003..29717137,29717214..29717252,29717367..29717432,29717566..29717661,29717836..29718072,29718171..29718291,29718422..29718457,29718721..29718818,29719008..29719307,29719928..29720017,29720139..29720204,29720672..29720827,29721062..29721160))
AA seq 761 aa
MHRVGSSGNTNNSTRPRKEKRLTYVLSDANDTKHCAGINSLSVLKGSVSGCDYLFTGSRD
GTLKRWTLAEDAATCSATFESHVDWVNDAVLAGYNTLVSCSSDTTIKMWNCMSDGACTKT
LRQHSDYVTCLASAEKNSNIVASGGLGGEVFVWDLEAALTPVAKSGESMEDDSSNAVNGS
GNAITSLRTISSSNCISMHTTQPHGYVPISAKGHKESVYALAMNDSGSLLVSGGTEKVVR
VWDPRTGSKKMKLRGHTDNIRALLIDSTGRFCLSGSSDSMIRLWDLGQQRCVHSYAVHTD
SVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLSTGEHPILQLALQDDSIWVATTDS
SVHRWPAEGSNPQKIIQRGGAFLAGNLSFSRARVSLEGSTLVPVNKEPIFTIPGIPGIVQ
HEILNNRRHVLTRDTADSVKLWEITRGVVIEDYGKVKFEEKKEELFEMVSIPAWFTVDTR
LGSLSVHLDTPQCFSAEMYSADLNIVGKPEDDKVNLARETLKGLLAHWLGKRKQRFGSQA
SANGDVSSGKDITTRSITHSRIEVDSNNENDSMVYPPFEFSTTSPPSIITEGSQGGPWRK
KITDLDGTEDEKDFPWWCLDCVLNNRLPPRENTKCSFYLHPCEGSTVQILTQGKLSAPRI
LRIHKVVNYVVEKMVLDKPLDSANPDATFAPGLAGGPVQLSSVGDGSFRSGLKQWQKLKP
SIEILCNNQVLSSDMSLATVRAYIWKKSEDLILNYRVIQGR
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgcaccgagtgggtagttcagggaacacaaacaattccactcgccctcgtaaagagaag
agattaacatatgtgttgagtgatgccaacgacacgaagcattgtgccggcataaattct
ttgtctgtacttaagggatcagtgtctgggtgtgattacctgtttactggaagccgtgat
ggcacactaaaaagatggacgctggccgaagatgctgctacgtgttcagcaacctttgag
tctcatgtggattgggttaatgatgctgttcttgcaggttataatacgcttgtttcttgt
tcttcagataccaccattaagatgtggaattgcatgtcagacggagcttgtaccaaaact
cttcgtcagcattctgactatgtcacatgccttgcttccgcagagaaaaatagcaatatt
gttgcctctggtggacttggaggggaggtttttgtatgggatcttgaagcagctcttact
ccagttgcaaagtcaggtgaatcaatggaagatgatagttcaaatgctgtcaatggttct
ggaaatgcaattacaagtttacgtactatcagctctagcaactgcatttctatgcacaca
actcagccacatggatatgttccaatctctgctaaaggtcataaggaatcagtttatgca
ttggcaatgaatgatagtggatcgcttctggtctctggtggaacagagaaggttgttcgt
gtttgggatccaagaacaggttcaaagaaaatgaaactaagagggcatacagataatatc
agggctctgctgattgattctactggaagattttgcttatcaggatcttctgattcaatg
atcaggctatgggatcttggtcagcagcgctgtgtgcattcttatgctgtgcatacagat
tctgtttgggcacttgccagtaccccaacatttagtcatgtatatagtggtgggagagat
ctttctttatacttgacagacttggccacaagagagagtctcttgctttccacaggggaa
catcccattctgcagttagctttacaagatgatagtatatgggttgcaacaacagattct
tcagttcatagatggcctgctgaagggagtaatccccagaagataattcaaagaggtggt
gcattcttggctggaaatttgtccttttcaagagcaagggtgtcattagaaggatcaacc
ctagtccctgttaataaagaacctatttttacgattcctggaattcctggaatagtgcaa
catgaaatattaaacaatagaaggcatgtcttgacaagggacactgctgattcagtgaag
ttgtgggagattacgaggggtgttgtcattgaggattatggaaaggtcaaatttgaggag
aaaaaggaagagctttttgagatggtgagcattcctgcatggttcactgtggataccaga
cttggaagtttatccgtacatttagataccccacaatgcttttcggcagagatgtattca
gcagacctgaacattgtggggaagcctgaagatgacaaggttaatctagcacgagaaacc
cttaaagggctcttggctcattggttggggaaaagaaagcaaagatttggatcacaagca
tcagctaatggggatgtgtcatccggaaaggatattactactagaagtattacccattca
agaattgaggtggatagtaataatgaaaatgattcaatggtctatcctcccttcgaattt
tctacaacttcccctccttctattattactgagggctctcaggggggaccatggaggaag
aaaatcactgacttagatggtactgaagatgagaaggactttccctggtggtgtctcgat
tgcgtgttgaataatcgcctaccccctagagaaaataccaagtgcagtttttatctacat
ccatgtgaaggttcaactgtccagatcctcacacaagggaaactaagcgcccctcgtatt
ttacgaatccataaagtagttaattatgttgttgagaagatggtccttgacaaaccattg
gatagtgccaatcctgatgcaacatttgctcctggtcttgctggagggccagtgcagctt
tcatcggtaggagatggatccttccgatctggattgaagcaatggcaaaagcttaagcct
tctatagagatattgtgtaacaatcaggtcttgtcctcagacatgagcttagccacggtg
cgggcttatatatggaagaaatctgaggatctgattctcaattacagggtgattcagggc
aggtga

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