Malus domestica (apple): 103451187
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Entry
103451187 CDS
T03194
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103451187
04121 Ubiquitin system [BR:
mdm04121
]
103451187
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103451187
Membrane trafficking [BR:
mdm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103451187
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103451187
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-Nse
zf-ANAPC11
zf-C3HC4_3
zf_RING_Vps8
FANCL_C
Motif
Other DBs
NCBI-GeneID:
103451187
NCBI-ProteinID:
XP_008388847
LinkDB
All DBs
Position
08:complement(join(19573799..19574430,19575761..19576136))
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AA seq
335 aa
AA seq
DB search
MSLSPPRSRDINNDDGTTPLYGLYWCYHCNRTVRTASNNPSETVCPRCFGQFLSEFDMSI
RPRLLVDYTSFDPSPEARLLEALSLMFDPLMRPFNRELYDPEADSRGRPWYWRRHLGHEG
RGAGVEPEVQDLRTNRRRRRRNPSFDGRENWEVESDPRTRSRPRNLIIVRPVEDPSNPVG
PTHRPQENPVLPAPRGVDLGNYFFGPGLHGLIEELTQNDRPGPPPVPEMAINAIPTVKIS
EVHLSNESCCPICMEEFKIGGEVRELSCNHIYHSDCIVPWLRLHNSCPVCRVEIQVCGGG
LVELGGSNSGGEGRTRRRVRWSRLGSLWPFRSRHR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgagtccacctcgttcgagggacattaacaatgacgatggcacaacaccacta
tacggactctactggtgctaccattgcaatcggacggtgaggactgcctccaacaaccca
tcagagacagtctgccctcgttgtttcgggcagtttctgtcggagtttgacatgtcgatt
agacctagacttctcgtagactacaccagtttcgatccatccccggaagctcgtctgctc
gaagcactttccctcatgttcgatccgctcatgaggcctttcaaccgtgaattatatgac
ccggaagccgattccagaggacgtccatggtattggcgacgccaccttggccatgagggc
agaggtgcaggtgtagaacctgaagttcaagatttgaggacaaataggagacggaggcgg
cgcaaccctagctttgatggtagagaaaactgggaggttgaatctgacccccgcactcga
agccgtcccaggaatttgattatagtccgacccgtggaagacccttctaatccagtggga
cccactcatagaccacaagaaaatccagtactacccgctccacgtggagtcgatctagga
aactacttttttgggccgggccttcacggactgatcgaagaactaacccaaaacgacagg
cccggcccgcctccggtacccgaaatggcaatcaacgcaataccaactgtgaaaatcagc
gaggtccatttgagcaatgagtcttgttgcccaatttgcatggaggagtttaagattggt
ggagaggtgagggagttgtcatgcaatcacatataccacagcgattgtattgttccgtgg
ctgaggctccacaactcttgcccggtttgccgggtcgagattcaggtatgcggtggcgga
ttggtagagttggggggctcgaatagtggcggagaggggcggacaagacggcgcgtgagg
tggagtaggttgggatctttgtggccatttcgatcaaggcatcgttga
DBGET
integrated database retrieval system
