KEGG   Malus domestica (apple): 103451319
Entry
103451319         CDS       T03194                                 
Name
(RefSeq) DNA polymerase zeta catalytic subunit-like isoform X1
  KO
K02350  DNA polymerase zeta [EC:2.7.7.7]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    103451319
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103451319
Enzymes [BR:mdm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     103451319
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   B-family DNA polymerases
    103451319
SSDB
Motif
Pfam: DNA_pol_B POL3_N REV3_N zf-C4pol DNA_pol_B_exo1 divDNApol
Other DBs
NCBI-GeneID: 103451319
NCBI-ProteinID: XP_028945844
LinkDB
Position
12:complement(join(28400734..28400907,28401085..28401702,28401954..28402257,28402367..28402572,28403106..28403213,28403348..28403623,28403774..28403920,28404348..28404939,28405252..28405394,28405692..28405960,28406237..28406461,28406726..28408118,28408411..28408779,28408863..28408954,28409053..28409224,28409361..28409516,28409752..28409820,28410455..28410497,28410576..28410688,28410814..28410863,28411167..28411224,28411475..28411557,28411823..28411922))
AA seq 1919 aa
MAASEAFSVRIVSVDYYMAPPIPGLDISYSSFQGGKVNEVPVIRIFGATPAGQKTCLHIH
RALPYLYVPCADIPIQLHQKGDSYTHDVALAIEKALKLKGNAGSKRQHVHGCSLVQARKL
YGYHSSEELFVKIYLYYPHDVSRAASLLLGSSVFDKCLQPHESHIPFILQFMVDYNLYGM
GHLHVSKIKFRHPIPDVFVHRRSVYNGQPSQDIDKTTCMSADFQADIRGHLSLGSPVWIS
STIPVDWTWNSPGEFEGSSDTDINSIKRQSICELEGDSTVDEVLNQQLKMYTSLSQTCSD
VKMVQSLVPILEECERTGIHEAAIPPDPAKPLAEEALKTLSVGLEFDNKLIKVHSEAESS
LCRTQLRKDVRSVEPMASQKDEGNFAGPQTDNLIDGEIIGSLPTQDSTKDSVPNAKLSLN
KELPSSQVIPTVNMKVADSEALGLLRWLATSQATDDINSDDELVCETILSPLLPATTIDN
VLNKANVDYENESQKECQDILDSVGDMIDFERLQERASYPSDRKNSSKSSSEYVIPQVDG
CGDDDFSTPCNGSVGSFSEIEGMSEFRTSSHQVQDASSIFNHKHKRKKLWGSLPFSETSK
MKTEGEHASLHIETKDPSGTSSSENEVGKRAGAGTCDAKDSSMLARCSVRDLMRRKRSYR
VEPPESSGREENEDTLLCAKHLDFQVSGADELDRKPHESSNFRLSLADQQSGSYKAYIYD
AKPTNPGCSLYGKLPLCSSNDNILHASTLDGKLDSNVLIGEEVGAGAMAQFRNFLITGPS
QVPSVNKRMHTWSAEHEVADGDGYVESGFESLSSNGGVYEMSFENPMGANATTVSAVLNN
ERSGVQKLGRDSVSSGLRHSPSEVIYPDDEDLIGMTFHKKPPVPDWKDRASKDASSLYDG
RATDDYFPFFVGDFPDEKEIQNKCVRSESSSHEESVMGVPTHYQTDGSFLYLLTPATSPP
SAEKVNRWLSSDEKDDVPPILPQGSQENHENHEEESKHFCTDRTGIAQREGDAVKVQTNS
ECSQDNSQISGPDGRSKLTPLSQIGFRDPASVGAGQQLTLLSIEVQAESRGDLRPDPRFD
AINFISLAIQNDSDPIVEVHVLLHSKAEGSQRSLDGISGCKVLVFYEEKYLFDHFMKIVC
PLDPDILMGWDIQSGSLGFLAERASYLGIGLLNKISRAPSESKVEGADLEVLEKAIQDKI
IPEAVIANSVVREDPVIEDEWGRTHASGVHVCGRIILNIWRLIRGEVKLNMYTVEAVAQA
VLRRKVPYISNKVLAKWFSSGPGQARYRCIEYVNERAKLSLEIMNQLDMINRTSELARVF
GIDFFSVLSRGSQYRVESMFLRLAHAQNYVAISPGSKQVASQPAMECIPLVMEPESGFYA
DPVVVLDFQSLYPSMIIAYNLCYSTCLGKVVPSEANTLGVSSFSPDPHDLHILKDQILLT
PNGVMYVPEKVRKGVLPRLLDEILSTRIMVKQAMKKLSSSQQVLHRIFNARQLALKLISN
VTYGYTAAGFSGRMPCAEIADSIVQCGRSTLEKAISYVNAHDKWKAKVIYGDTDSMFVLL
KGRTLEDSFKIGREIASEISAMNPHPVALKMEKVYSPCFLLTKKRYVGYSYESPEQIKPI
FDAKGIETVRRDTCAAVAKTMEQSLRLFFEHQDMYEVKTYLQRQWKRIISGRVSLQDFVF
AKEVRLGTYRASSISSLPPAAVVATKAMKTDPRAEPRYAERIPYVVIHGEPGARLVDMVV
DPLNLLAIDSPYRLNDLYYIHKQIIPALQRVFGLLGADLNEWFSDMPRPAREAIGKRAFY
ASNPHRTRIDYYYLSRHCILCGELVQGSAHLCNQCSENKSCAAVAVIGRTSKLEREMQQL
AAICRHCGGGDWVIDSGIKCTSLGCSVFYERRKVQKELQGLASVAAETGFYPKCMVEWF
NT seq 5760 nt   +upstreamnt  +downstreamnt
atggcggcttcggaagctttcagcgtacggatcgtctccgtcgactactacatggcgccg
ccgatcccaggcctcgatatctcttacagtagcttccaaggtgggaaggtgaatgaggtg
ccagttataagaatattcggcgccacgccggctggtcagaagacttgcttgcacattcat
agagcattaccatacttatatgtgccatgcgctgatatcccgattcagctgcaccagaaa
ggtgattcatacacacatgatgtagctcttgctatagagaaagctttgaagctcaaaggt
aatgctggttcaaagcgacagcatgtacatggttgcagccttgtccaggctaggaagctt
tatggttaccactcatcggaggagttgttcgtgaagatatacctctactatccccatgat
gtctctcgtgctgcaagtcttcttctgggaagttcagtttttgataaatgcttacagcct
catgaatctcacattcccttcattcttcaatttatggttgactacaacttgtatgggatg
ggtcatctacatgtatcaaagattaaattccgtcatccaataccagatgttttcgtccat
agaaggtctgtttacaatggacagcctagtcaggacatagataaaacgacttgcatgtct
gctgattttcaggcagatatacgtggccatctgtctttgggttcacctgtttggatatct
tctacaattccagttgattggacatggaattctcctggtgaatttgaaggttcctcagat
acagatattaacagcattaaacgtcaaagtatttgtgaacttgagggcgattctactgta
gatgaggttcttaatcagcagcttaagatgtatacttccctctcacaaacttgttcagat
gtgaagatggttcagtcacttgtaccaattttggaggagtgtgaaaggactggaatacat
gaggcagcaataccacctgatcctgccaaaccacttgctgaagaagctttgaaaactctc
tcggttggtcttgaatttgacaacaagcttattaaagtgcacagtgaagctgaaagttct
ctgtgtcgaactcaattaaggaaagatgtaaggtctgtggagccgatggcatctcaaaaa
gatgaaggaaactttgctggaccccaaactgataatcttattgatggagaaataattgga
tctctcccaacacaagattctactaaagatagtgttccaaatgccaaactatcattgaat
aaggaacttccatcatcacaagtaatcccgacggtaaacatgaaggttgcagatagtgaa
gcactaggtcttcttagatggcttgccacttctcaggccactgatgatataaactctgat
gacgaacttgtttgtgaaacaattcttagtcccttgttgccggcaacaacaattgacaat
gttctaaacaaagctaatgtggattatgagaatgaatcccaaaaggagtgtcaggacata
cttgattcggttggtgatatgattgactttgaaagattgcaagaaagagcttcttaccct
tcagatcgaaagaattcttcaaaaagttcgtctgagtatgtgattccccaggtggatggt
tgtggggatgacgatttctcaactccttgtaatggatcagttggaagcttttctgaaata
gaggggatgagtgaatttaggacctccagccatcaggtgcaagatgctagctccatcttc
aatcataagcacaaaaggaaaaaattatggggctctttacctttctctgagacctcaaag
atgaagacagaaggggaacatgccagtttacacattgaaacaaaggaccctagtggtaca
agttcttctgaaaatgaagtgggaaaacgtgcaggcgctggaacttgtgatgcaaaagac
agtagtatgttggcaagatgctctgtgagggacttgatgaggagaaagcgatcctaccga
gttgagccacctgaaagtagtgggagggaggaaaacgaagacacacttctctgcgcaaag
catttagattttcaagtatcaggtgctgatgagcttgacaggaagcctcacgagtcttct
aacttcaggctatcattagctgaccaacaatcaggaagttataaggcttatatatatgat
gctaaaccaaccaatcctggttgttctctgtatggtaaacttccactgtgttctagcaat
gacaacattttacatgcaagtacgttagatggaaaattggattccaatgtgttgattggt
gaagaagttggtgctggtgcaatggctcaatttcggaacttcttgattacaggcccttct
caagttccttctgtgaacaaaagaatgcatacttggtctgctgagcatgaagtggctgat
ggagatggttatgttgaaagtggctttgaaagcttatcttccaacggtggagtatatgaa
atgtcttttgagaatcccatgggtgcaaatgccacaactgtcagtgctgttctaaacaat
gagaggtctggtgtccaaaaactgggtagggactctgtttcatctgggctcagacactca
ccgtctgaggtcatctatccggatgatgaggacttaattggaatgacattccacaagaag
cctcctgttccagactggaaggacagggcatctaaagacgcttcatctttatacgatgga
agagccacggatgactatttccccttctttgtgggagatttcccggacgagaaagaaatt
cagaacaagtgtgttagaagtgaatctagctctcatgaagaatctgttatgggtgtccct
actcactatcaaactgatggctctttcttgtatttgttaacacctgcaacttcaccccct
tctgctgaaaaggtgaatagatggttgtcaagtgatgaaaaagatgatgttccacctatt
ctcccccaaggatctcaagagaatcatgaaaatcatgaagaagaaagtaaacatttctgc
actgacaggacgggaatagcacaaagagaaggagatgctgttaaagttcaaacaaactct
gaatgctcacaagataattctcagatttctggcccagatgggagatcaaagctcactcct
cttagtcaaattggattcagggaccctgcaagtgttggcgcaggccaacagctgacattg
ttaagcatagaggttcaagcagaatcaagaggagatcttcgacctgatcctcggtttgat
gccatcaattttatctctcttgctattcagaatgatagtgatcctattgttgaagttcat
gtgcttttgcacagtaaagctgaaggttctcagaggagtcttgatggaatttctggctgc
aaggtgttggttttttatgaggagaagtacttatttgatcattttatgaaaattgtgtgc
ccattggacccagatattttgatgggttgggatatacaaagtggttctcttggctttttg
gcagaaagggcttcatatcttggtataggtttactcaacaaaatatctcgggcaccatct
gaatccaaggtggagggtgcagatttagaagttttggagaaagcaatacaagataaaata
attcctgaggcagtcattgccaattcagttgtaagagaagatccagtaattgaggatgaa
tggggaagaactcatgccagcggtgtccatgtttgtggtagaattatccttaatatatgg
cgactgatccgtggtgaagtcaagctcaatatgtacacagttgaggctgttgctcaagct
gtgttgaggcgaaaagtcccatatatttctaataaagtactggcaaaatggttttcaagt
ggccctggacaagccagatatcgatgtattgaatatgtaaatgagagagcgaagctgagc
cttgaaataatgaatcagttggacatgataaatcgaacatcagaacttgcacgtgtcttt
ggcattgactttttttcagttctttctagaggttcacaataccgtgtcgaatccatgttt
ctgagattagcccatgcacaaaactatgttgccatatctcctgggagtaaacaggttgct
tctcaaccagcaatggagtgcatacctcttgtcatggaaccagagtctggtttttatgca
gatccagttgtcgtgttggattttcagtctctttatccatcaatgattattgcatacaat
ctttgctattctacatgccttggaaaagttgtaccttcagaggcaaatacacttggagtt
agttcgttttcaccagatccccatgaccttcatattttaaaagatcagattctgcttact
ccaaatggtgtcatgtacgtacccgagaaggttcgcaaaggtgtattaccccgtttgtta
gatgaaatattgtcaacaagaataatggttaaacaagctatgaaaaagctgtcttcttca
cagcaagttcttcacaggatttttaatgcaagacagcttgctttgaagttgatatcaaac
gtaacgtatggctatactgctgctgggtttagtggccgcatgccttgtgccgagattgca
gacagtattgttcaatgtggccgtagtacactggaaaaggctatttcatacgtaaatgca
catgacaagtggaaggcaaaagttatttatggcgacacagacagcatgtttgtcctccta
aaaggacgcactcttgaagattcttttaagattggccgcgagattgcatctgaaattagt
gctatgaatccgcatccagttgctttgaagatggaaaaagtttacagcccgtgctttctc
cttactaagaagcgttatgttggttacagttatgaaagccctgaacagatcaaacctatt
tttgatgctaaaggtattgagacagttcgtagggatacatgtgcggctgttgccaagaca
atggaacagtctttgagacttttctttgaacatcaggacatgtatgaggtcaaaacatac
ttacagcgtcagtggaagcgaatcatatcaggaagggtgtctcttcaggattttgtattt
gcaaaggaagttcgcctaggcacctatcgggcaagttctatttcgtcacttccaccagct
gcagttgttgccacaaaagctatgaaaaccgaccctagggcagaaccacgttatgcagag
cgaataccttacgttgtgatccatggggagcctggggctcgtctggttgacatggtcgtg
gatccattgaatctcttggctattgattcaccgtacagattaaatgatctttattacatc
cataaacagataatcccagctttgcagcgagtgtttgggcttcttggggctgacttgaac
gagtggttttcagatatgccccggccagccagggaagccattggtaaacgcgccttttat
gcttccaatccacaccgaaccagaattgattattactatctttcaaggcattgtatcttg
tgcggggagttggtccagggatcagcccatctatgcaatcaatgttctgaaaacaaaagt
tgtgctgctgtagctgtaattggaagaacttcgaaactggagagagagatgcagcagctt
gctgctatctgtcgacattgtggaggaggggactgggtcatagacagtggcattaaatgc
acttctcttggatgctcggtgttctacgagaggcgtaaggttcagaaagaattacaaggg
ctcgcttctgttgctgcagaaaccggtttctacccgaaatgcatggtggagtggttttga

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