KEGG   Malus domestica (apple): 103451406
Entry
103451406         CDS       T03194                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
mdm  Malus domestica (apple)
Pathway
mdm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103451406
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103451406
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103451406
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     103451406
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 103451406
NCBI-ProteinID: XP_008389036
LinkDB
Position
02:join(7248801..7248861,7249610..7249678,7249789..7249904,7250006..7250068,7250465..7250542)
AA seq 128 aa
MSWAGAEDTFLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELELDKEELPPHMTLVPEAEIKRAQKAERDATDLKGSMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcgtgggctggggcagaagatactttcctttccacttctcttgctacctatcttgac
aaaaagcttcttgtcttgctgcgagatggacgaaagctgttgggattgctacggtctttt
gatcagtttgctaatgttgttcttgaaggcgcatgtgaaagagtaattgtgggtgacctt
tattgtgacatcccattaggtctatatgtaatccgtggggagaatgtcgtcttaattgga
gagctggaattggataaggaggagcttccccctcatatgactttggtaccagaagcagag
ataaaaagggctcagaaagcagagagggatgcgacagatttaaaaggctccatgagaaaa
agaatggagttccttgattttgattaa

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