Malus domestica (apple): 103451413
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Entry
103451413 CDS
T03194
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
103451413
Enzymes [BR:
mdm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
103451413
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
103451413
NCBI-ProteinID:
XP_008389039
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Position
12:complement(31165062..31167116)
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AA seq
684 aa
AA seq
DB search
MLSMEKVTQMRRWVILGVLALALLGLLFFFPINNGAYETTRISGRRALRSVTGNELNFNQ
MLTEQTQNTVELNNGIVRVTFSNPGGDVIGIQYKGIDNLLDIKNPPSNRGYWDLVWKNGE
DRLQGTTFKIVTSTADQIEISFNKTYDVSLGDWTLPLNVDKRYIMQRGRAGFYANAIYER
LEGWPELRIDQTRLALKLRQDKFQFMAISDDRQRFMPTAEDRKGDHSQTLAYREAVLLTN
PSNPEFKGEVDDKYQYSNDVKDIKVHGWISTDDAIGLWMITPSIEFRSAGPFKQELTSHV
GPTALTVFLSSHYVGKDVGLTFADGEAWKKVFGPVFVFLNSDVPSSNASFSLWENAKEQM
YEEVKSWPYNFTQSEDFPNSDERGSVAGQLLIRDSYINESLVSASYAYVGLAASGYAGSW
QTECKGYQFWTQADKQGYFYVKDVRPGNYSLYATVPGFIGDYKYEYDITIEAASEVSLAN
LTFEPPRNGPTLWEIGTPDRSAAEFNIPDPYPTLVNRLFTGNYANRFRQYGLWERYGDYY
PDRDLIYTVGTDNYRDDWFYAHVTRNRNGTYEATTWQIVFQLENVWNTGNYMLQLALASA
NYAELQVRFNNRNDAPHFSTGLIGKDNAIARHGIHGLYWLFSVDVPSYRLQQGYNTIYLT
QSRNWGPFAGLMYDYIRLEGPPPN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgatggagaaggtgacgcaaatgaggagatgggtgatccttggagtattagca
ctagcattacttggtttgctcttcttcttccctattaacaatggtgcatacgagacgacg
aggatttctggaaggcgagcactcaggagcgttactggcaatgagctcaacttcaaccag
atgctaacagagcaaactcagaacacggtagagctgaacaatggcattgtccgggtcact
ttttcaaatcccggaggagacgtcattggaatccaatacaagggaattgacaacttgctt
gacatcaaaaaccccccaagcaatagaggttactgggatcttgtatggaaaaacggcgag
gacagactacaaggaacaacatttaagattgttacatcgacggcggatcaaatagagatt
tcttttaataaaacttatgatgtttccctcggagattggacgctacccttaaatgttgac
aaaaggtacataatgcagcgtggtcgcgctgggttctacgcgaatgccatatacgagcgt
ctagaagggtggccggaattgcgcatagatcaaacaagacttgctttgaaacttcgacaa
gataaatttcagttcatggctatatcagacgacagacaaagattcatgccaacagccgaa
gatcgcaaaggagaccactctcagacccttgcctatcgtgaagctgttcttttaacgaat
ccaagcaatcccgagtttaaaggagaggtggatgacaagtaccaatactccaatgatgtc
aaagacattaaggttcacggttggattagcactgacgatgctatagggctttggatgatc
acacctagtattgagtttcgttcagcggggccattcaagcaggaacttacctctcacgtc
ggcccaactgccctcactgtgtttcttagtagtcactacgtcggcaaagacgttgggttg
acctttgcagacggtgaggcatggaagaaggttttcgggcccgtctttgtgtttcttaac
tcagacgttccaagctcgaatgcgtccttctctctctgggaaaatgcaaaagaacagatg
tatgaagaagtaaagagttggccatacaatttcactcagtccgaagactttcctaactcc
gatgaacgcggatcagtggctggtcagttactaatacgggattcgtacatcaacgagagc
ctagtctcagcaagttatgcttatgtgggactggctgcgagcggatacgcgggatcatgg
caaacggaatgcaagggttatcagttctggactcaagctgacaagcaaggttatttctac
gtgaaagatgttcgaccggggaactatagtttgtacgcaactgttcccggcttcattggg
gactacaaatacgagtacgatattacaattgaagcagcaagtgaagtcagtttagctaat
cttacctttgaacctccgagaaacggtccgaccttgtgggaaatcggcacccccgatcga
tcagccgcggagttcaacataccggatccatatccaacccttgtgaaccgattgttcact
ggtaattacgcaaacaggtttaggcaatatggcttgtgggaacgatacggagattactac
cctgaccgtgatctcatctacaccgtcggcactgacaattacagagatgattggttttac
gctcatgtgacaaggaacagaaatggtacatacgaggcaacgacatggcaaattgtattt
caacttgagaacgtttggaacaccggaaattatatgctccaactggcgttggcctcggcc
aactacgcagaactgcaggtccgattcaacaaccggaatgacgcacctcatttttcgacg
gggctaatagggaaggacaatgccatagcaaggcatggaattcatggtttgtactggctc
ttcagtgtcgatgtgccgagctatcgacttcaacaaggatacaacaccatatatcttact
caatcaagaaactggggacctttcgcaggacttatgtacgattacatccgactggaagga
cctcctccaaactga
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